Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2229 ATGGGTGTCATGACTAGCCACCGCAAACGCCCCGAAGAGTGCATGAACGTCAACCACTCCACCACCACCACCACCACTCCACCTCCAGATTCCCAGAGAAAGCGACCCAGATTGTTGAACTCGATGTCCCGACCCGCACCGACACCGAACGGCATCGTTTCGAGGATTTCCCGGTACCCGGATGCTAAGCCGCCGTTGATTCGGGAGGTTCATGCGCCGTGCAGGAACCGGAAATTCGACCTAGTGCGGCGAGATTTGGCAGAACCGAGGACCCCGGCTAGGGCTAGGGCTACTGTCGACGTTAAGGGGAGCGTTCTGTTCGCAGCTTACGAAGAGGCGAGGCGTTCAGCATTGGCGGAGGTTCGGTACTTGCCTTCGAAGGGGAAGGAGGTGATTGATGTGGACGCTGAGAGTAGCGGGCGTGGGGTTTCAGATGATTCGGGTGTGGGAGAGGTGGTTGAGGTTCATGATTTGGAGGCTAAGGTTGTTGTGGATGGTGGGGTTGTTCGGCGGCGGCAGTCAACGTCGTCGCCGGATTCTGCGTTGACTAATAAAGGTGACAACAGCTTGAAGGTGGTGGTGAGTGGTGGGAAGGTGTGGGGTTCTGAGATTGATTTTTCGAGTGTTCAGGCGTATAAGAAGTTGATTGAGTCTGCTGATAGGCGAGATGATAGGCTTAAGAGGCTGGAGTTTGAGATTACTCTGAATGAGAAGCGCAGGGAGACGTTTAATTTGTTGCGTCCGAAGAAGGAATTAGTGGAGGTAGTGCCGAAAGAGCCTTTCGTCCCTCTTACAAAGGAGGAAGAAAATGAGGTTGCACGTGCCTTTTATACTAACAGGAAGAAGATATTGATTAGCCATGAGAATTCGAACATTGAGATCTCAGGAGAGAAGTTTCAGTGCCTTGGCCCGGCTGCATGGTTAAATGATGAGGTGATAAATTTGTACCTTGAGTTGCTGAAAGAGAGGGAGCAAAGAGAACCACAGAAGTATCTGAAATGCCATTTTTTCAATACCTTTTTCTACAAAAAGTTAATAGGTGGCAGGAACGGTTATGATTTCAAATCTGTCCGTAGATGGACCACCCAAAGGAAATTGGGATATGGCCTACTTGAATGTGATAAAATATTCGTACCTATCCATAGAGAGATCCATTGGTGCTTGGCTGTTATCAATAAAAAAGATAAGAAATTCCAGTATCTTGACTCATTGAAGGGAAGAGATAGCCATGTCCTAAATGTGCTGGCTAAATATTTTGTAGATGAAGTAAAGGACAAGACTGGAAAAGATATTGATATAAGTGATTGGGAGAAGGAATTTGTTGAAGACCTTCCTGAGCAGAAAAATGGATATGATTGTGGGGTGTTTATGATTAAATATGCTGACTTTTATAGCAGAGGCTTGGGGCTTTGTTTCAAACAGGAACACATGCCTTACTTCCGGGTTAGGACAGCTAAGGAATTATTGAGACTGAGAGCTGACTAA 1485 0.4727 MGVMTSHRKRPEECMNVNHSTTTTTTPPPDSQRKRPRLLNSMSRPAPTPNGIVSRISRYPDAKPPLIREVHAPCRNRKFDLVRRDLAEPRTPARARATVDVKGSVLFAAYEEARRSALAEVRYLPSKGKEVIDVDAESSGRGVSDDSGVGEVVEVHDLEAKVVVDGGVVRRRQSTSSPDSALTNKGDNSLKVVVSGGKVWGSEIDFSSVQAYKKLIESADRRDDRLKRLEFEITLNEKRRETFNLLRPKKELVEVVPKEPFVPLTKEEENEVARAFYTNRKKILISHENSNIEISGEKFQCLGPAAWLNDEVINLYLELLKEREQREPQKYLKCHFFNTFFYKKLIGGRNGYDFKSVRRWTTQRKLGYGLLECDKIFVPIHREIHWCLAVINKKDKKFQYLDSLKGRDSHVLNVLAKYFVDEVKDKTGKDIDISDWEKEFVEDLPEQKNGYDCGVFMIKYADFYSRGLGLCFKQEHMPYFRVRTAKELLRLRAD* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2229 494 MobiDBLite consensus disorder prediction 16 31 - -
Lja6g2229 494 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 154 - -
Lja6g2229 494 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 208 492 - -
Lja6g2229 494 MobiDBLite consensus disorder prediction 1 15 - -
Lja6g2229 494 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 154 - -
Lja6g2229 494 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 208 492 - -
Lja6g2229 494 MobiDBLite consensus disorder prediction 1 58 - -
Lja6g2229 494 ProSiteProfiles Ubiquitin-like protease family profile. 292 464 IPR003653 GO:0006508|GO:0008234
Lja6g2229 494 Pfam Ulp1 protease family, C-terminal catalytic domain 307 487 IPR003653 GO:0006508|GO:0008234
Lja6g2229 494 Gene3D Adenoviral Proteinase; Chain A 252 491 - -
Lja6g2229 494 SUPERFAMILY Cysteine proteinases 260 492 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2229 Lja-Chr6 51229508 51237088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2229 K08592 - gmx:100780703 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1294 4 11600285 11605180 Lja6g2229 6 51229508 51237088 PCT