Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2220 ATGGATGCGAAAACTGCTGAAGCTGCTCCAGAGCCTTTGAAGTATCAGACTTGGTACTTGAAAGTTTCCATCCACTGTGAAGGTTGCAGGAGGAAAGTAAAGAAAGTTCTGAAGAACATTGATGGTGTTTTCACCGCAACAATCGACCTACAGCAGCAGAAAGTAACTGTCACTGGAAGTGTTGGTGTTGAGACTCTTCTCAGGAAGCTGGTCAGAGCTGGAAAACACGCTGAGATTTGGCCGGAGAATCTCGAGGGGAAGGGAAAAAGCTCCAGCAAAGAGAAAAAGGAGAATAAGAGCGGAACAAAAGAACCAAAAGGCTTAGAAAACAAGGGAACTGAAAGTGCTGCAAAGTGTGGCAAAGAAAGCAAGAGCAGCAGCTCAAAAACCGGCGGTGGCTCGCCGGAAAAGCCTCCGGTCTTCAACCAGGATCCGCCGGAGGGTGGTGGCGGAGGGGGTTCTGGTAAGAAGAAGAAAAAGAGAACTCAGAGTGGTGGCAATGGGTTGAGTGCAGGTGCACCATCCAGGAATGCACATGAGCACAGTGGATTCCAGTTCCAGAATCCTGGGCAGGTTGTGGGCCAGGTGAATCTGGACCCTACACGTCAGCAATCATTCTCATACCCAGAAGCACATTATCCTCCTCCAATGGTTTATTATGTTGCATCTCACAACAGATTTTATCCCATGGGAAGATTTGGTGGTTCTTACTATGTTCCCCCTTCACCCTACATTTCTGCAGGCATAGATCAAGATGGTGCTTGTCAATTTCAATCACCACCCTTGGTTTCCTTTGAGATATTCAGTGATGAAAATGCTAATGGATGTTCCATTATGTGA 840 0.4714 MDAKTAEAAPEPLKYQTWYLKVSIHCEGCRRKVKKVLKNIDGVFTATIDLQQQKVTVTGSVGVETLLRKLVRAGKHAEIWPENLEGKGKSSSKEKKENKSGTKEPKGLENKGTESAAKCGKESKSSSSKTGGGSPEKPPVFNQDPPEGGGGGGSGKKKKKRTQSGGNGLSAGAPSRNAHEHSGFQFQNPGQVVGQVNLDPTRQQSFSYPEAHYPPPMVYYVASHNRFYPMGRFGGSYYVPPSPYISAGIDQDGACQFQSPPLVSFEIFSDENANGCSIM* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2220 279 MobiDBLite consensus disorder prediction 119 133 - -
Lja6g2220 279 Gene3D - 14 79 - -
Lja6g2220 279 CDD HMA 20 78 IPR006121 GO:0046872
Lja6g2220 279 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 109 279 - -
Lja6g2220 279 MobiDBLite consensus disorder prediction 81 191 - -
Lja6g2220 279 ProSiteProfiles Heavy-metal-associated domain profile. 23 79 IPR006121 GO:0046872
Lja6g2220 279 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Lja6g2220 279 MobiDBLite consensus disorder prediction 81 118 - -
Lja6g2220 279 Pfam Heavy-metal-associated domain 22 73 IPR006121 GO:0046872
Lja6g2220 279 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 109 279 - -
Lja6g2220 279 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 102 - -
Lja6g2220 279 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 6 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2220 Lja-Chr6 51147345 51148510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2220 - - gmx:102666396 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2220 6 51147345 51148510 Lja6g2220 6 51147345 51148510 ECH
Lja4g1277 4 11392100 11394731 Lja6g2220 6 51147345 51148510 PCT