Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2215 ATGGATTACAGAAAGCTAGAACTCAACATCATATCTGCGAAAGATCTCAAAGATGTTAATCTCTTCTCTAAGATGGATGTCTACGCTGTTGTCTCCGTCTCCGGCGATCCGCTTCATCCTCAGACCGCCACCACCCATGTCCACAAAGACTCCGGCACCTCCCCGACATGGAACTTCCCGGTGAAATTCGTCGTCAACGAAACGCTCGCCCAGCAGAATCGTCTCTCTCTCGAGGTCAAGCTCCTCTCCGACCGTACCCTCGCCGGAGATACTGTCATCGGCACCGTCCATATCCCGATCAAGGAGCTTCTCGACAACCCCGGCGGTGGCGGAGGCGGGGACTCGTTCCGGCAAGTTAGTTACCAGGTGAAGAGGTCATCAGGGAAGGCTAAGGGAACGTTCAACTTCTCCTACAAATTCGGCGAAAAGGTCGACGCTCCGGCGACCAAGGCGGGGAAGACACATGAGCCGGTGATGGCTTATCCACCTCCGGTGGCTGGATCTAGCTCGGTGCCGTACGGGACGCCGCAAGCTCCGGGATATGGCTACCCGCCTCCGGCGTACGGTGCTCAGCCGGGTCACGGTTACCCACCGCAACAGCCGGGTTATGGTTATCCACCGCAGCAAGCGGGTTATGGATACCCACCTCAACAACCGGGTTACGGTTACCCGCCTCAGCAAGCGGGTTATGGTTACCCGCCTCAGCAAGCGGGTTATGGGTACCCGCCTCAGCAAGCGGGTCAGAAACCGAAGAAGAACAAACTCGGAATGGGATTGGGAGCAGGGTTGCTTGGTGGTGCGTTGGGAGGGATGATTCTTGGAGACATGGTGTCTGATGCTGGTGATTATGATGCTGGATTTGATGATGGTGGTGGTTTTGATTTTTAA 888 0.5597 MDYRKLELNIISAKDLKDVNLFSKMDVYAVVSVSGDPLHPQTATTHVHKDSGTSPTWNFPVKFVVNETLAQQNRLSLEVKLLSDRTLAGDTVIGTVHIPIKELLDNPGGGGGGDSFRQVSYQVKRSSGKAKGTFNFSYKFGEKVDAPATKAGKTHEPVMAYPPPVAGSSSVPYGTPQAPGYGYPPPAYGAQPGHGYPPQQPGYGYPPQQAGYGYPPQQPGYGYPPQQAGYGYPPQQAGYGYPPQQAGQKPKKNKLGMGLGAGLLGGALGGMILGDMVSDAGDYDAGFDDGGGFDF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2215 295 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Lja6g2215 295 CDD C2_SRC2_like 5 136 IPR044750 GO:0006952
Lja6g2215 295 Pfam C2 domain 5 106 IPR000008 -
Lja6g2215 295 MobiDBLite consensus disorder prediction 178 192 - -
Lja6g2215 295 MobiDBLite consensus disorder prediction 167 253 - -
Lja6g2215 295 PANTHER PROTEIN SRC2 1 234 - -
Lja6g2215 295 Gene3D C2 domain 2 139 IPR035892 -
Lja6g2215 295 SMART C2_3c 5 112 IPR000008 -
Lja6g2215 295 PANTHER INGRESSION PROTEIN FIC1 1 234 - -
Lja6g2215 295 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 143 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2215 Lja-Chr6 51110318 51111560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2215 - - mtr:MTR_2g436900 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2215 6 51110318 51111560 Lja6g2215 6 51110318 51111560 ECH
Lja4g1273 4 11355009 11356068 Lja6g2215 6 51110318 51111560 PCT