Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1273 ATGGAGTCCAGAACCTTAGAACTCAACATTGCATCAGCGAAGGATCTTAAAGATGTCAACCTCATCGGCAAGATGGATGTCTACGCCGTCGTTTCACTCTCCGGCGACACCCACTGCCACTACAAGATCAAAACCCAAGTCCACCGAGACGCCGGCACCAACCCCACCTGGAACTTCCCCATCACCTTCACAATCAACGAAACCCATGCCCGCCAGAATCGGTTGATCCTCGAAATCAAGCTCCTCTGCCAGCGCACCCTCGCCGCCGACAAGGAAATCGGTGACCTCATTGTTCCCGTCAGGGAGCTGATCGACCAGCCCGGCGACGGGAAGTCCTTCCAGCATGTTAGTTACCAGGTCAGACGACCGTCAGGGAAACCCAAAGGAGCGTTTAATTTCTCCTACAAATTTGGCGGGAAATTCGCTACTCCGGCGAATCATGTGCCGGAGCCGGTCATGGCTTATCCTCCTCCGGTGGCGGGGTCGTCCGGTTCTGCGCCGTACCCTGGTGGTTATCCTCCATCAGCGCCGCTATATAGCGGCGGATACACTTACCAGCCGTCGGCGCCGGTGTATGATGGGTACCCGGGTCAAGGTGGGTACGAGTACGGTCAGCCGCCGCCGGTTCAGAAACCGGCGATTGGGAACAAGTTTGGAATGAGAATGGGATTGGGAGCCGGATTGCTTGGTGGAGCTATCGGTGGGATGCTGATTGGGGGGATGATGTCTGATGCTGGCGGTTGTGGTGCCGGCTACGACGGTGGTTTCGGTGATGCTGGTGGCGGTTTTTGA 792 0.5694 MESRTLELNIASAKDLKDVNLIGKMDVYAVVSLSGDTHCHYKIKTQVHRDAGTNPTWNFPITFTINETHARQNRLILEIKLLCQRTLAADKEIGDLIVPVRELIDQPGDGKSFQHVSYQVRRPSGKPKGAFNFSYKFGGKFATPANHVPEPVMAYPPPVAGSSGSAPYPGGYPPSAPLYSGGYTYQPSAPVYDGYPGQGGYEYGQPPPVQKPAIGNKFGMRMGLGAGLLGGAIGGMLIGGMMSDAGGCGAGYDGGFGDAGGGF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1273 263 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Lja4g1273 263 Pfam C2 domain 5 108 IPR000008 -
Lja4g1273 263 PANTHER OS01G0934100 PROTEIN 1 256 - -
Lja4g1273 263 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 138 IPR035892 -
Lja4g1273 263 Gene3D C2 domain 1 149 IPR035892 -
Lja4g1273 263 SMART C2_3c 5 112 IPR000008 -
Lja4g1273 263 CDD C2_SRC2_like 5 133 IPR044750 GO:0006952
Lja4g1273 263 PANTHER INGRESSION PROTEIN FIC1 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1273 Lja-Chr4 11355009 11356068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1273 - - lja:Lj0g3v0342079.1 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1273 4 11355009 11356068 Lja6g2215 6 51110318 51111560 PCT