Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2204 ATGGAAGAGAATACTGAGCTTGAGGAAGGAGAGGCTTGCTATCATGATGATGATGATGATAAAGGCATCAATTACCTTGATTCTCTGTCTTACTTTGACGAGAAGATTCAACATTTGCTGGGCCATTTTAAGAAGGACTTTGAAGCTGGTCTGTCTGCTCAGAATTTGGGTCCAAGGTTTGGTGACTATGGTTCCTTTCTACCTACCTATGAACGCTCTCCTTGTATACCGTCTCATCCAAAGACTCCACAAAGAAACCACCGCTCACCAAAACCTCCTATCAAACTCCACAAGGAGGCTGCGTCTCATAACAGAAAAGAACCTTCAGATGTGCCTCCTTTTGCGAGGCTCGGAAATGCTTCCCATAATTCGCATTCCTTTCATGATGCAATAGCACCTTCAGTAGATGACTCAGTGAAGAGCAACGGAGGAATTTCTTCCAATGATGTAGCTGGAAGGTTCACTTTGAAAGACGATTCTAGAGCAAAGACCGGAAACTCAGCTGAGCAAAGAACACTGAAGTTCCGAATCAAAATGAACTCCAATATATTAGTGAAAAAAAATGCAGAAATTTATAGTGGCCTTGGGCTTGATGACTCTCCATCTTCCTCAATGGGGAATAGCCCTGCGGAAAGTGAAGGCATTCTACCTGTATCTCAACAGAAAGCTGAAGATTCTCCAACCAGCATTATTCAGGTTATGACTTCTTTAACTGTCCCTGGGGGTGTTCTAATATCACCTCTACATGAAAGTTTGCTCAACTTGATAAAAACTGAAAAAGTTATTGAAGACATCAGACGTATGTCCTCTCTTAATGGTCATGAAGAACCTTGTTCCATGTCTACTGATGAATCGGATTCTCTTGTTGGGAATGGGCATTTGAAGAAGAGGACAGTGAGACAACATGAAAAGCGGTTGGAATTGAAGCATATGAATGACACTCTCTCTGAGAATGATATCACATTGCATATGAGGAAAAGGTTAGGAAATAGAACACCAGATTGTAAGGACTTTTTCTCTAATGATTTGAAATCGACACCTTTGTCAAGTTCAATTTGTGATGCTGGTGAAACTGCTAAAGTCACAGCCAAAGCTTCTGCAGTCTCCAAGGAGGTTAATGAGAACAGGGTGCAAGGCAGAATAGTTTCTGTTGAAGCATTGAAGGAGTCGTCATTGGAATCTGTATCTGGTCAGGATTTTGAGAAGATTGAAAAGCAAAATGCAGGAAATGGTTTTATGAAAAGTGTTTTAGAAGAGAAACTGGAAAATTCCCACAAGGACATGTCTGCTGACCCTAAGAATAATGACAAGGGTAATCCTTACATGGTGTCCAAAAAGGTTGAGCGTGATGCAGTAATTTGTAAGATAGATAAAAAGCATGAGACTCATCAGAAGGTAAAGGCTGTATCTGAGGGGAAGAATAAATCAAAAGTTTATCAGAGTCCTAGAAAATCTGAGGCTGTTGCAAGAAAAGATGGCCTTGGTGGTGCTAATAATGCACTGACAACTGATAAAGGGAGTGCTGGCTTGGACACTATTAGTAGAAGTAAAATGAATAAAACAAAGTCTCCGAAGGATAGTAAGGTCGGAGATATTAACAAAGATTCATTGAAAGGACACAAATCAGAAAGGAAAGTTGTTGGTCCTCATGGTAATAATGCAATAAAAAATATTAACATTAATAATGAAAAACAGAGTGCATTTAGGTCTAAAGGAAAGGAAAGACCAAATGGCAATAAAATGGTCAACCAGTTGCTTACTGGGCCATGCATAAAAGATGCTTCAGGTTTATTTCCTATGGTTGAAAATAACCCTGCTCCTGAGACGATTCCATCGGTAGCTGCACCCCTAGTTATTGCAGAAGATTGGGTTGCTTGTGACAATTGCGAGAAGTGGAGGCTTCTACCTACTGGTTTAAAGCCCGAGCAGCTTCCAGAGAAATGGTTGTGTAGTATGCTAAATTGGCTGCCTGGGATGAATTCTTGTGATATCAGTGAGGATGAGACAACTAAGGCAGTTCAAGCGTTTTATCAATTGCCAATTTCTGAGTGTCAAAATAACATGCAAACCCATGCCACTGGAACTGCAATTGGAGTGAGCTCTGCTGATTCTTTGCAATTTGGCCTGAATCACAAGAAGTCCAGCTCTGATGTATTGCCTGACGGAGTAAAGAAGAAGCACGTCGTTAAGGAAAAGACAATGTCAGGAATCAATAATGACGTGCTTCAGTTCTCAAACTCTGCCAAGATAAATGCTCAAGTGTCTGGAAACAATAGAAGTTTGAATGACATGAATCAGCAACCTGCAGACTCAAACCCAATGAAGAAGATGGGTTCTAAACAGTCTAGCAGGTTTAACAATATTGTAGAGGAGAAACATGTGCCTAAACAGAACGATAAGCAAGTAAATGGAGGTGACAGAAAACACATTAAATTGAAACGGAAGATGGATGCTGATCATTATGGATTGGGAACTCCTAAGAAATCAAAAACTGAAAATGTTTGCTATGCTGATGAAAAATTGGATCCTAGCATTGGCCTTGAGAAAGTGGGTCTATCTGCAAGAAATGGTGGTTTACCAGCACAAGCTAGTGGGAAGGATATGAGAAAATATGATGAGTACTGTTCATCTCTGGATGTACAGGACAGATTACTAGTCCCTGTAAAGAAAGAGGGAGATCAAGCTCAGGTTTCGTCAGGTGGTGGGTCCTTGGATGTGAAGAACAGCCGCAAAAATGATGGTCTAATGAAGAAAAGGAAAGTGCAGGACTGGTTGGATGATGAGAAGCATAACACCTCTCACTCCTTGCATGCTGATAAGCAGTGTGGTGAAGAGGGAAATGCAAGTAAATTTAGGAAGGAAAAGAAGCATAAAATTTTGAATGAAGAGGTACGATCAGTAATTGAAGGTGATGATAATTTGACAAAAGTTGGGATGAGGCAAGTTTGCCTATTAGACAATAGGGACCAATTTGGGACAGAAGTAAGATATGTCGATAAAGGCCACCAACCAAGGAAGCATATAAAAAATATTGCATCTCATCGAGCTTTGGATGGTATGGATCCACTGGGCAAGAATTTGGGTTCTAGACAGCTTTCATTGGCAGAGACTTCAAGCTCTTCTAAGGTTTCTGGGTCTCTTAAAGCTAAAACCAACTTTGATGATGTGAGAGGTTCACCTGTGGAATCTGTTTCCTCATCACCTTCTAGGGCCTGTAACTTGAATAAGCGTATTTTGGCAGTAGGGGGCATTTCAGTGAAGGATGATGCTACAAAAGGTGGTTTCTCTTCAGTAGGTTCCAGGAGAAGCATGGATTGTAGGGAGGGAAAGCTATCAATAAAATTGAAGAAGGACCGAGTTTCATATAACTCACATCCTGGATCTCACAAATTATCTTCAATAGAGTACCAGGTTGAGGAAGCTAAAGGCAAAGCCACAGTCCAAGCTAAAACTTCTTCTGAAATTAAGTATAATCATTTGCTTAAAGATGGTGTTCCAATTGAACAACATGGAGATGATGCCAATGACATGCATCACGAGGAGAAAGTAAATGAGGACAACCAGGAAAATGATTTTTCTTGGCAGAAATCTGATAAGAATACTTCATTGCACAACATGGAAAAGAACGAAAGATCTGCTTCTCAGGTTGTTACAGATAAGATGAAGGCTTCAGGTTCGGAGAATTGTCATTCCAAAAATGGCAGGAGGTATGATTCAGCAGTTGACCCAAGTTATCATGCATCTGGTCCCGAGACAAGAAATGATGCTAAATACTGCTCTTTGAAGTCTAGATGCGGGACTGACAATATTCTTAAGAAGAGTTCTTTAAGACACGGGTCAACGGAAACTTCAAAGCAAACTGTGCTGAAGCAAAGAGACTTTGAGAATTCTGTTCTGAAGATGGATACTCAATGTAGCACTGATAAAAAGACCATCTCCCAGCAGAACCTGACTCAGGATGGTGACGAAGAAAGCAAAGCTCATGTATGCACAGAATCTAGAGATGGGAAATCCATAGTTCTCTCATCTGCTGCGGGTCAAATCAAAAGGGAAACTCACGTGTGTTCTAGAACTCTAATGGGAGATAACTCTAATGCCAATGCAGATGTGTCTGGCAACGGTGGTGTGACCAGGTTAAAGAGAAATTCTGCTGATGTTAGCAGCAATCTTTTAGTTAATTGTAGTTCCGTAAATTTTGCACCTGAACAACAACTCACTGTATCAAGTCCTCTGGGAGCAAATTCTAGCCAAACTGCTGGTGACACCCTGGATGAGGCCATAAAACTAAAAGATAGAGCAGATCATTACAAGAACTCTGGGTTTAATTTTGAAAGCAATGAGACTTATTTTCAAGCTGGTTTGAAGTTTCTGCACGGAGCATCTCGATTAGAAAGTTGTCACAGTGAGAGTAGCAAGCATGGGGAGATGAATCATATGCAAATTTATGTTACTGCAGCCAAACTTTTAAAGTAA 4473 0.406 MEENTELEEGEACYHDDDDDKGINYLDSLSYFDEKIQHLLGHFKKDFEAGLSAQNLGPRFGDYGSFLPTYERSPCIPSHPKTPQRNHRSPKPPIKLHKEAASHNRKEPSDVPPFARLGNASHNSHSFHDAIAPSVDDSVKSNGGISSNDVAGRFTLKDDSRAKTGNSAEQRTLKFRIKMNSNILVKKNAEIYSGLGLDDSPSSSMGNSPAESEGILPVSQQKAEDSPTSIIQVMTSLTVPGGVLISPLHESLLNLIKTEKVIEDIRRMSSLNGHEEPCSMSTDESDSLVGNGHLKKRTVRQHEKRLELKHMNDTLSENDITLHMRKRLGNRTPDCKDFFSNDLKSTPLSSSICDAGETAKVTAKASAVSKEVNENRVQGRIVSVEALKESSLESVSGQDFEKIEKQNAGNGFMKSVLEEKLENSHKDMSADPKNNDKGNPYMVSKKVERDAVICKIDKKHETHQKVKAVSEGKNKSKVYQSPRKSEAVARKDGLGGANNALTTDKGSAGLDTISRSKMNKTKSPKDSKVGDINKDSLKGHKSERKVVGPHGNNAIKNININNEKQSAFRSKGKERPNGNKMVNQLLTGPCIKDASGLFPMVENNPAPETIPSVAAPLVIAEDWVACDNCEKWRLLPTGLKPEQLPEKWLCSMLNWLPGMNSCDISEDETTKAVQAFYQLPISECQNNMQTHATGTAIGVSSADSLQFGLNHKKSSSDVLPDGVKKKHVVKEKTMSGINNDVLQFSNSAKINAQVSGNNRSLNDMNQQPADSNPMKKMGSKQSSRFNNIVEEKHVPKQNDKQVNGGDRKHIKLKRKMDADHYGLGTPKKSKTENVCYADEKLDPSIGLEKVGLSARNGGLPAQASGKDMRKYDEYCSSLDVQDRLLVPVKKEGDQAQVSSGGGSLDVKNSRKNDGLMKKRKVQDWLDDEKHNTSHSLHADKQCGEEGNASKFRKEKKHKILNEEVRSVIEGDDNLTKVGMRQVCLLDNRDQFGTEVRYVDKGHQPRKHIKNIASHRALDGMDPLGKNLGSRQLSLAETSSSSKVSGSLKAKTNFDDVRGSPVESVSSSPSRACNLNKRILAVGGISVKDDATKGGFSSVGSRRSMDCREGKLSIKLKKDRVSYNSHPGSHKLSSIEYQVEEAKGKATVQAKTSSEIKYNHLLKDGVPIEQHGDDANDMHHEEKVNEDNQENDFSWQKSDKNTSLHNMEKNERSASQVVTDKMKASGSENCHSKNGRRYDSAVDPSYHASGPETRNDAKYCSLKSRCGTDNILKKSSLRHGSTETSKQTVLKQRDFENSVLKMDTQCSTDKKTISQQNLTQDGDEESKAHVCTESRDGKSIVLSSAAGQIKRETHVCSRTLMGDNSNANADVSGNGGVTRLKRNSADVSSNLLVNCSSVNFAPEQQLTVSSPLGANSSQTAGDTLDEAIKLKDRADHYKNSGFNFESNETYFQAGLKFLHGASRLESCHSESSKHGEMNHMQIYVTAAKLLK* 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2204 1490 MobiDBLite consensus disorder prediction 1181 1253 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 910 954 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 500 517 - -
Lja6g2204 1490 PANTHER CW-TYPE ZINC FINGER 1 1490 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 93 110 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 756 780 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 1207 1224 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 518 547 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 72 113 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 891 954 - -
Lja6g2204 1490 ProSiteProfiles Zinc finger CW-type profile. 617 670 IPR011124 GO:0008270
Lja6g2204 1490 MobiDBLite consensus disorder prediction 1225 1239 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 464 556 - -
Lja6g2204 1490 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1490 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 200 219 - -
Lja6g2204 1490 MobiDBLite consensus disorder prediction 464 490 - -
Lja6g2204 1490 Gene3D - 618 672 - -
Lja6g2204 1490 Pfam CW-type Zinc Finger 623 668 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2204 Lja-Chr6 51012824 51019502 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2204 - - lja:Lj0g3v0059609.1 2940.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1260 4 11112082 11120998 Lja6g2204 6 51012824 51019502 PCT