Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1260 ATGCAAGGCAATAATACTACTGAGGCATGCCGTTATAATAAGGATGTTGGAGGCAACATTGGCTTTGATTTTGGCTACCAAATTGATGAGAGGCTTCAGGTCGCTCTGGGCCATTTTATAAAGGAGTTTGAAGGTGGTTATATTTCTGCTGAGTCTTTGGGTCCAAAATTTGGTGAGTATGGCTCCTTTATGCCTACGTGGGAACGCTCTCCTAATCTTCAATCTCATCCAAGGACTTCACAAAGACATCCAAAATCTCCTAGTAATCTCCACTTGGAGGCTCCATCTCATCACTCAAACGCACCTTTAAATATGCCTCCTTCTATGAGGCTTGGAACTGCTTCTCATAATGCTCCTCCATTTCATGATTTAAGAGCACCTTTAGTAGATGACTCAGCGAAGAAGGACACAAGAATTTCTTCCAATGCAGAAATAGAGAAGTTCACTTTGAAAGATGATTGTGCAATTAAGTCAGAAAAAATTACTGACCAAAGAGTGCTGAAGTTGAGAATCAAAGTGAAATCAGATATCTTAGGAAAAAAGAATGCTGCAATTTATAGTGGACTTGGACTTGATAACTCTCCATCTTCATCAATGGGGAACAGCCCTGAGGAGAGTGAAGTCATGCCACCTATATCTAAAGAGAACCCTGAAGAATCTCCAACTAGCATTGTTCGGGTTATGACATCCTTCACTATCCCTGGCGGTGTGCTAATATCACCTCTACATGACAGTCTGCTCTACTTGAAAAAGGAAAAGGTTCTAAGAGACAGCAGACCTATGTCTTCTCTTAGTGGTCATCAAGAACATTGTTCCATGTCTACTGATGAATCAGATTCTTTTGCGGGGAACAGAGATTTGTTGAAGAAGAGGAGAGTGGGAATGGTGGCCCAAAATGAAAAACAGTATATTAATGGCAACTGTTCCAAGAATGATATGACATTGCAACAAAAGAAAATATTCGGAAATAGAACTCCAGATGGTAAGGACTTTCTCTCTACGGACTTGAAATCCACACCTCTGTCAAGTTCAATTTGTGATGCTGGTGAAGCTGCTGAAGTTACTGGTAAGGGTTTTAAAATATCCAAGAAGGTCAATAAGGATGGAGTGGAAGGCAGAAGGGTTTCCGTTGAAGCTGTGAAGGAGGATTCACTGGAGTCAATATCTGGTCAGGATTTTGGCAAGATCGGAAGGCAAAATACAGGAAATAGTGTTTTGAAAAAAGTTTCAGAGCATAAGCCAGAAATTTGCCAGAATAATAATGCTTCTGATCTTATGAATAATCGCAAGTACAATGCTTTGATGATTTCAGAAAAGGCTGAGTGTGATCAGAAAGGAAGGGCAAAATCTGAGGGCAAGAATAAGTCAAAAGGTGAATGGAGTCCTGGAAAAGCTATGACCGCCACAGAAAAAGATAGCATTGGGGCTACTAATAATTCGGTGATTACTGATAAAAAGAGTGCTGATATTGGTGTTACTGGTAAAAATAAAATGCTTAAAATAAAGGCATTGAAGGATAATAAGACCAGAGATTCTTTGAAAGAAAAAAAACCAGAGCGGGAAGTTGTTGGAATAGACCGAGCTCCTATTAGTAAGGCTAAAATAAATGCTAACCTTGATAACATTGAAGGAAAGAGCACACATAGGGTTAAAGTAAAGGGAAACTCAAGTGAAAATAAAGTGGTTAATCAGTTATTAGCTGGTCCAGGTGTAAAAGATGCTCCAGGAGCGTATCCTATTGCTGAAAATATATCAACTCCTGAGATGGTTCCACCGCCACCCCCTGCAGCACCTCAAATTATTGAAGAAAATTGGGTATGTTGTGACGAGTGCGAGACATGGCGGCTTCTGCCTATGGGTTTAAAGCCAGAGCAGCTTCCAGAGAAATGGCTGTGTAGCATGCTAAATTGGCTGCCTGGAATGAACCGATGTGACATCAGCGAGGAGGAGACAACAAATGCACTTTATGCTTTATATCAAATTCCAATTTCTGAGGGTCAAAATAACATGCAGAGCAATCCTACTAGACCTGAAACTGGAGTGAGCTCTGCTGATGCTATGCAATTTGACCTGAATCACAAAATATCCAGTTCTGATGGAATGTCTGCCCGAGGAAAGAAGAAACTAGGTATCAAGAAAAAGACTACGTCAGAAATAAGCAGTGACATGCATCAGTTGTCAAATACAGGAAAGAACAATGCTCAAGAATCTGGAAAAAATAAAAGCTTGATTGATGTCAATCAGCAGCTTGCAGGCTCAAATCTTTTGAAGAAATCTAGTTCTAAAGATTCAAATGGGTTGAAAAAATCGATAGAAGAGAAAAACACCCCTGAAGAGAAAGAAGAGCAATTGAATGGAGGTGACAGAAGTCATGTTAAATTGAAACGTAAGGTGATGACTGATCAATATAGTTTTGGGACCCCGAAGAAATCTCGGTCCGAAGTTGTTCACTCTGCTGATAAACAACTGAATCCTGACATGGACTTTGAGAAGGTGGGTCTAAATTCAAGGAGTTGTTTGCCGGAAAAGGCTGGTGGGAAGAATATGAGGGAGCATGATGAATATTGTTTATCCAAGGATGTACTGAACAAGTCAGTAGTTCCTCTAAAGAAAGGAGACCAGGCACAGTTCTCATCAGATGATGGGTCATTGGATGTAACAAACAGTGGTAAAAATGGTTCAAATAAGAAAAGGAAATCTAATGACTGGCTTGATAATAAGAAATGTAACAACCCATTGTCCGTGCAAGGTGATATGGGATCTGGTGAAGAGAGCAATGCAAGTGGATTTAGGAAAGAAAAGAAGCGTAGAGTTCTGAATCCTGAGGAAAAATCAATAGCTGAAGGTGATGATATATTGAGTAGAAGAGGTGGGATGAAGCAAATCTTCTTATCAGACAGCAGGGACCAAATGGTTGTTGGGACACAGGTGAAAAATGTTGATAAGTCCAAACAGCCGAGGAAGCTGAGAAAAAGTGTTGCTTCTTACGAAGATTTCGGTTGTTTTGATTCACCAGGCAAGGATTTGGACTCCGGACAACTTCCATTGGCAGCAACTTCAAGCACTTCTAAGATTTCAGGATCTCATAAAGCTCGAAACAACCTTGCAGGTGCAAGAGGCTCACCGGTAGAATCTGTTACCTCTTCACCTTTGAGGACCTCCAACCTGGACAGGCGTATTTTGGCAGCAGGGAACACATCAGAAAAAGTTGATTCTACAAAAGGTGCCCCCTCTTCAATGACTTCCGGAAGAAGTTCGGGTAATATGGTTGGAAAGCTATCAGTAAAAATGAAGGGGAGAAAGTTATATGACCTACCTACACAACATGGTAATTGGGGGAATGGTTCACTTCATGAGGATAAAATGAACAAGAATGATCAAGAAAATGCTTCTTGGCAGAAACCCGGAAAGATTACATCATTACAGGGTAAGGAAAAGAACAGAAGGTCTGGTTCTGAGGTTAGAAGGGATAAGATGAATATGTCAGCTTCAGAAAATGGTTTTTCCAAAAAGGGGGTAAACTATGAGTCAGCAGTAGCACTTACTCCTAGTCATTGCGCTTCTGGTACTGAGACTAGAAATGATGCTAAAATTAGCTCTTCTGATTCTAGACTCAAGAAAGTTGGCAACCTTAGTAAGAAAAATTCTTCAAGGCATTGGTCAAATGAAGCTGGAAAGCAAACTGAACCAAAACAAAAAGATTTGGAAAATTCAGTTCTGAAAGTGGGCGCTCAAAGTGGCACTAGTGAAAAGATTATCTCCCAGCAGAACCAGATTCATAACACTGAGGAAGAAAACAAAGCTATTACAGTACACACTGGATCAAGAGATGGGAAAGCCAAAATTCTCTCATCTTTGGAGAATATAGCAAAAATGGAAACATCATATGTGGATTCTAGGACTGCAACTGAGTCCCAAAAGGGAGATATGTCTAATGGGAATCCAGTCCATGCAAGAAATTCTGCTGGTGTCAGTTGCAAGGTTGGAGTCAATCGTAGTTCGGGAAATTCCACACTTGATGCCCAACTCACTGAGTCAAGTCCTGTGACAACAAATTCTAGCCAAACTGCATTTAGCATTCTGGAAGAAGCCAGAAAGCTAAAAGATTCTGCGGATCATTATAAGAACACTGGGTTTGAGTTTGAAAGTAATGAAACTTATTTTAAAGCTGCTTTGAAGTTTCTGCATGGATCATCACTTGTAGAAAATTGTCACAGCGAGAGTAGCAAGCTTGGGGAGGTGGATCAAATACAAATATATGCTACTGCCGCTAAACTTTTTGAATCCTGTGCTCATAAATATGACAGATGCCAAGAAATGGTCTCAGCTGCTTTGGCATACAAATGCATGGAGGTGGCATACATGAGACTTGTTTACTGTAAACATTCTAGCATAAACAGGGATCGGCATGAGTTGCAATCAGCTTTACAAATGGTTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCTGATATTGATAACTTAAACAACATGGTGGCAGTGGATAAAGCTACTTTGCCAAGGGGTCCTAACACTCATGTTGCTAATAATCATGTTATATCTGCTCGGAATCGGCCAAATATTGGCAGGCTTCTTGATTTTACCCAGGACATTAACTTTGCAATGGAGGCTTCTAGAAAATGTCAGAGCACTTTCATGGCTGCTAAGTTGATCATGGAAGAGGCTCGGAATAGTGATTGTATGACTTCTATTAGGAATGTTATTGATTTCAGCTTCCAAGACGTAGAGGAGTTTGTACATCTGGTTCTGATTGCAACAAAAGCAATAACTCGTGCTGGTCTAGGTGGTACTAGAGATTAG 4821 0.4045 MQGNNTTEACRYNKDVGGNIGFDFGYQIDERLQVALGHFIKEFEGGYISAESLGPKFGEYGSFMPTWERSPNLQSHPRTSQRHPKSPSNLHLEAPSHHSNAPLNMPPSMRLGTASHNAPPFHDLRAPLVDDSAKKDTRISSNAEIEKFTLKDDCAIKSEKITDQRVLKLRIKVKSDILGKKNAAIYSGLGLDNSPSSSMGNSPEESEVMPPISKENPEESPTSIVRVMTSFTIPGGVLISPLHDSLLYLKKEKVLRDSRPMSSLSGHQEHCSMSTDESDSFAGNRDLLKKRRVGMVAQNEKQYINGNCSKNDMTLQQKKIFGNRTPDGKDFLSTDLKSTPLSSSICDAGEAAEVTGKGFKISKKVNKDGVEGRRVSVEAVKEDSLESISGQDFGKIGRQNTGNSVLKKVSEHKPEICQNNNASDLMNNRKYNALMISEKAECDQKGRAKSEGKNKSKGEWSPGKAMTATEKDSIGATNNSVITDKKSADIGVTGKNKMLKIKALKDNKTRDSLKEKKPEREVVGIDRAPISKAKINANLDNIEGKSTHRVKVKGNSSENKVVNQLLAGPGVKDAPGAYPIAENISTPEMVPPPPPAAPQIIEENWVCCDECETWRLLPMGLKPEQLPEKWLCSMLNWLPGMNRCDISEEETTNALYALYQIPISEGQNNMQSNPTRPETGVSSADAMQFDLNHKISSSDGMSARGKKKLGIKKKTTSEISSDMHQLSNTGKNNAQESGKNKSLIDVNQQLAGSNLLKKSSSKDSNGLKKSIEEKNTPEEKEEQLNGGDRSHVKLKRKVMTDQYSFGTPKKSRSEVVHSADKQLNPDMDFEKVGLNSRSCLPEKAGGKNMREHDEYCLSKDVLNKSVVPLKKGDQAQFSSDDGSLDVTNSGKNGSNKKRKSNDWLDNKKCNNPLSVQGDMGSGEESNASGFRKEKKRRVLNPEEKSIAEGDDILSRRGGMKQIFLSDSRDQMVVGTQVKNVDKSKQPRKLRKSVASYEDFGCFDSPGKDLDSGQLPLAATSSTSKISGSHKARNNLAGARGSPVESVTSSPLRTSNLDRRILAAGNTSEKVDSTKGAPSSMTSGRSSGNMVGKLSVKMKGRKLYDLPTQHGNWGNGSLHEDKMNKNDQENASWQKPGKITSLQGKEKNRRSGSEVRRDKMNMSASENGFSKKGVNYESAVALTPSHCASGTETRNDAKISSSDSRLKKVGNLSKKNSSRHWSNEAGKQTEPKQKDLENSVLKVGAQSGTSEKIISQQNQIHNTEEENKAITVHTGSRDGKAKILSSLENIAKMETSYVDSRTATESQKGDMSNGNPVHARNSAGVSCKVGVNRSSGNSTLDAQLTESSPVTTNSSQTAFSILEEARKLKDSADHYKNTGFEFESNETYFKAALKFLHGSSLVENCHSESSKLGEVDQIQIYATAAKLFESCAHKYDRCQEMVSAALAYKCMEVAYMRLVYCKHSSINRDRHELQSALQMVSQGESPSSSASDIDNLNNMVAVDKATLPRGPNTHVANNHVISARNRPNIGRLLDFTQDINFAMEASRKCQSTFMAAKLIMEEARNSDCMTSIRNVIDFSFQDVEEFVHLVLIATKAITRAGLGGTRD* 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1260 1606 MobiDBLite consensus disorder prediction 906 923 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 754 791 - -
Lja4g1260 1606 PANTHER CW-TYPE ZINC-FINGER PROTEIN 6 1601 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 1040 1089 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 192 219 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 720 740 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 260 281 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 1105 1169 - -
Lja4g1260 1606 Pfam CW-type Zinc Finger 604 650 IPR011124 GO:0008270
Lja4g1260 1606 MobiDBLite consensus disorder prediction 442 472 - -
Lja4g1260 1606 ProSiteProfiles Zinc finger CW-type profile. 599 652 IPR011124 GO:0008270
Lja4g1260 1606 PANTHER CW-TYPE ZINC FINGER 6 1601 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 876 894 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 442 458 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 261 281 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 694 740 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 927 943 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 1186 1235 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 1141 1160 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 68 95 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 1020 1090 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 762 791 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 873 943 - -
Lja4g1260 1606 Gene3D - 599 654 - -
Lja4g1260 1606 MobiDBLite consensus disorder prediction 68 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1260 Lja-Chr4 11112082 11120998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1260 - - gmx:100793863 1917.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1260 4 11112082 11120998 Lja4g1260 4 11112082 11120998 ECH
Lja4g1260 4 11112082 11120998 Lja6g2204 6 51012824 51019502 PCT