Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2125 ATGAGCAACGAAAACGAAAAAGCTCCTGCACCTTCTCCTTCCTTTGTGTTAACCAAAGGTGTCAATGGTCTCGATAAGGTTCTCCTCCGCGAGTCTCGTGGTTCCTCCGCCGAGGTGTACCTGTACGGCGGTCAGGTGACTTCTTGGAAGAACGACCATGGCGAGGAATTGCTTTTTCTCAGTAGCAAGGCTATGTTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCGATATGCTTCCCACAATTTGGAAGCCTTGGCACCCTTGACTCACATGGATTTGCTAGAAATCGGTTCTGGACCATTGACAATGACCCTTCACCTTTTTCAACCAATACTTTGAACAAAGCCTTTGTTGATTTGATTCTCAAGCCCTCTGAAGAAGACATGAAGATTTGGCCTCACAGTTTTGAATACCGTCTTCGGGTAGCTTTGGGACCTGGAGGAGATCTGATGTTGACATCTCGGGTTCGGAACACAAGCAGTGATGGGAAGCCATTTTCATTCACTGTTGCTCATCATACATATTTCTCTGTATCAGACATAAGTGAAGTTCGGGTAGAGGGATTAGAAACCCTGGATTATCTTGACTTCTTGCAGAACAAGGAGCGCTTTACTGAACAGGGGGATGCTTTAACATTTGAATCAGAAGTTGACAAGATATATGTTAGCACTCCCACAAAGATTGCAATTATTGATCATGAAAAGAAGAGAACATTTGTTTTGCTTAAAGATGGCCTTCCTGATGCTGTGGTGTGGAACCCTTGGGACAAGAAAGCAAAGGCTCTGGCCGATTTTGGTGATGATGAGTATAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAACCTATCACTTTGAAACCTGGAGAAGAATGGAAAGGAAGACTAGAGCTTTCTGCCGTTCCCTCTAGTTATTGTAGTGGGCAGCTTGATCCCCGGAAAGTTCTTCAGGGCAGCAGGTGA 969 0.4499 MSNENEKAPAPSPSFVLTKGVNGLDKVLLRESRGSSAEVYLYGGQVTSWKNDHGEELLFLSSKAMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTNTLNKAFVDLILKPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDISEVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVLLKDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAVPSSYCSGQLDPRKVLQGSR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2125 322 Pfam Aldose 1-epimerase 26 300 IPR008183 GO:0005975|GO:0016853
Lja6g2125 322 CDD D-hex-6-P-epi_like 31 301 IPR025532 -
Lja6g2125 322 SUPERFAMILY Galactose mutarotase-like 20 300 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lja6g2125 322 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 11 317 - -
Lja6g2125 322 PIRSF PHexose_mutarotase 11 307 IPR025532 -
Lja6g2125 322 Gene3D - 22 307 IPR014718 GO:0030246
Lja6g2125 322 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 11 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2125 Lja-Chr6 50160370 50167653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2125 K01792 - gmx:100809080 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1641 4 15435350 15439034 Lja6g2125 6 50160370 50167653 PCT