Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1641 ATGAGTAGCTACGACTTGCTGAAGGGCATCAATGGCCTCGACAAGATCCTTATTCGCGATGCGACTGCGACTGGTTGCTCCGCCGAGGTGTACTTGTACGGTGCTCATGTGACTTCATGGAAGAATGACCATGGGGAGGAGGAGTTGCTTTTTGTCAGTAGTAAGTCCATATTTGATCCTCCAAAGGCAATTCGTGGAGGAATTCCAATATGCTTTCCTCAATTTTCAAATCATGGTACACTTCCCTCGCATGGGTTTGCTAGAAACCGGTTCTGGACAATTGACAATGACCCTCCTCCTTTTCCAACAAATGCTTCGGAGACAGCCTTTGTTGATTTGATTCTTAAACCCTCAGAAGATGACATGAAGATTTGGCCTCACAGTTTTGAGTTCCGTCGAAGGGTAGCCCTGGGACCTGGAGGAGATCTAATACTGAAATCTCGGATTAGGAACACAAACAACGAAGGGGAGCCATTTTCATTCACTTTTGCTAATCATACATATTTCTCTGTGTCAGATATAAGTGGAGTTCGGGTAGAGGGATTAAAGACACTGGATTATCTTGACAACTTGCAGAAAATGAAACGCTTTACAGAACATGGGGATGCTATAACATTTGCATCAGAAGTTGACAGGATATATCTCAGCACTCCTGCAAAGATTTCAATTCTTGATCATGAGAAAAAGCGATCATTTGTGTTGCGTAAAGATGGTCTTCCTGATGCTGTTGTGTGGAATCCTTGGGATAAGAAAGCAAAGTCTATGGCTGATTTTGGTGATGATGAGTATAAGCATATGGTTTGTGTGGAAGCTGCTGCTATTGAAAAGCCCATCACTTTGAAACCAGGCGAAGAATGGAATGGAACTCTAGAGCTTTCAACTGTTTGA 888 0.4313 MSSYDLLKGINGLDKILIRDATATGCSAEVYLYGAHVTSWKNDHGEEELLFVSSKSIFDPPKAIRGGIPICFPQFSNHGTLPSHGFARNRFWTIDNDPPPFPTNASETAFVDLILKPSEDDMKIWPHSFEFRRRVALGPGGDLILKSRIRNTNNEGEPFSFTFANHTYFSVSDISGVRVEGLKTLDYLDNLQKMKRFTEHGDAITFASEVDRIYLSTPAKISILDHEKKRSFVLRKDGLPDAVVWNPWDKKAKSMADFGDDEYKHMVCVEAAAIEKPITLKPGEEWNGTLELSTV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1641 295 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 5 295 - -
Lja4g1641 295 SUPERFAMILY Galactose mutarotase-like 10 292 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lja4g1641 295 CDD D-hex-6-P-epi_like 25 293 IPR025532 -
Lja4g1641 295 PIRSF PHexose_mutarotase 12 295 IPR025532 -
Lja4g1641 295 Gene3D - 11 294 IPR014718 GO:0030246
Lja4g1641 295 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 5 295 - -
Lja4g1641 295 Pfam Aldose 1-epimerase 21 292 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1641 Lja-Chr4 15435350 15439034 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1641 K01792 - gmx:100801977 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1641 4 15435350 15439034 Lja4g1641 4 15435350 15439034 ECH
Lja4g1641 4 15435350 15439034 Lja6g2125 6 50160370 50167653 PCT