Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2120 ATGGGATGTTCACACTCAAAGCTGGAAGATGAAGAATCAGTTCAGCTTTGTAAAGATAGAAAGAAGTTCATCAAGCAGGCTGTTGAGCAAAGAACTCGATTCGCGACCGGACACATGGCCTACATTGAATCTCTGAGTAGGGTTTCAGCAGCTCTTCGTGATTACATCGAGGGAGACGAGCCTCGCGAGTTCTCATTAGACTCGGTCATGAACCCGCCTTTCACACCTGTGAAGAAAACTGGCCCAGGCTTCATTCCCATCTCAGCAAAATCCTTCACACCTTCATCAACAATTGAGTTTGGAGTTGGACCAAATTCCACTTTGAAAGTGAATTACCTTAGGCCAGGTGGTAATCCAGCAATTTCGGTTGAGGAAAGGCCTCAGTCTCCTGAGATGATGAGGGTTGAATCATATTCTCCGATGCGGCATTATGGCATGGATGGTTTTTTTGCTATGCAATCCCCACCTGGGAACCCTTCAATTTTTGCTTACTCTCCCAATAATAGGCCTAGTATCCCTCCCCCTTCACCTCAAACTTCTCAATGGGACTTCTTTTGGAACCCATTTTCATCATTGGACAACTATGGTTACCCTACCCGAAGCAGCCTTGATCAGACCACTATGGATGATGAGTACAGAGGACTGAGGCAGGTCCGAGAAGAGGAGGGAATACCAGACTTGGAAGAAGATGAAACTGAACAAGAAGTTTATGTTAGGAAAAGAAAAGTAGCAGAAGAAAGAACCAGACCTGATATGCATTCCTCCAAAGAACAAGTCATTGTTGAAGATGTTGATGAGGATGAGGATGAGGATGATGATGATCATGATCATGACGAACATGATGTTGATGATGACGATGATGATGATGATGATGAGGAAGAGGACGAGGACGAGGACGAGGATGAGGAAGAGGAGGGAACAAATACTGAAGCTGAGCATGATGCCACAGGTTCGCAGGCCCATGGTAGTTCTAGTTTTGAAGTATCAAAATCTCAAGCTGCTGGTCATATTAAGTCCAGACATCGCGAAATGGCAATCGGTAAACAAGAAGCTAAGGAAGAAGCACCAGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCGGAAGTTATCAATGATCTTGAAGCTCAATTCACAACTGTCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCGCAGTACTTATTGCCACCTAATGAACTTTCAGCATCGAAGTTGCTAAACCCGGTAGCTCTGTTCCGGTCAGCTTCTTCACGGTCTACTTCATCAAGATTTTTAATGAATTGTACTAGCACTATAGAGGAAGGTTGTGAGGGCACTAAAAATATCACAGAGGAACATTGTATGGTTTCCGGTAGTCACCAAACCACATTGGACAGATTAAATGCATGGGAGAAGAAGCTGTATGAGGAAGTCAAGTCTGGAGAACGTGTCCGAATTGCATATGAGAAAAAATGCAAGCAGCTAAGGAACCATGAAGTAAAAGGAGATGACCCCTCTTCTGCAGATAAAACAAGAGCAGCCATTAGGGATCTAGATACCAAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTGCAGGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGGTGCAAGGGCTGGAAAAGATGTGGAAAGTAATGGCAGAATGTCATCAGACACAGAAGAGAACCTTAGATGAAGCTAAGGTTCTTCTAGCTGGCACTCCTTCAAAATCACATGCCAGAAAACACTCTTCCATGTCAATGACTGATCCAAATAGACTCGCACGTTCAGCCTCGAATCTCGAATTTGAGTTAAGGAACTGGCGAAACACCTTCGAGTCTTGGATCACTTCTCAAAGATCCTATGCTCATGCACTAACCGGATGGCTTCTCCGGTGTGTGAGATCTGAGTCTAATGATGTATCGAAGCTACCATGCTCTCCGCATAGATCCAGTGGCACCCACCCTTTATTTGGACTCTGTGTTCAGTGGTCAAGGCACCTAGACGCCATACATGAGAAGGCAGTGCTTGATGGCTTGGATTTTTTTGCAGCTGGAATGGGGTCCCTCTATGCACATCAATTGAGACAAGATTCTAGGCCAAGACAAACCAATGGGGGCATGGAAATGGTGGAGTTTGGTCAGGTGGAAGAGGAGGTAATGGCACCGGAAAAACTGGCTGAGGTTGCTATTAAGGTACTTTGTGCTGGAATGTCTGTTGCTATGAGCTCATTGGCAGAGTTTGCTTTTGATTCTGCTGAGGGATACAGTGAAGTTATTAAGCAGTGGGAGAATGTGAAATCTCAAAATACTTCTAGTGAGACATAG 2358 0.4444 MGCSHSKLEDEESVQLCKDRKKFIKQAVEQRTRFATGHMAYIESLSRVSAALRDYIEGDEPREFSLDSVMNPPFTPVKKTGPGFIPISAKSFTPSSTIEFGVGPNSTLKVNYLRPGGNPAISVEERPQSPEMMRVESYSPMRHYGMDGFFAMQSPPGNPSIFAYSPNNRPSIPPPSPQTSQWDFFWNPFSSLDNYGYPTRSSLDQTTMDDEYRGLRQVREEEGIPDLEEDETEQEVYVRKRKVAEERTRPDMHSSKEQVIVEDVDEDEDEDDDDHDHDEHDVDDDDDDDDDEEEDEDEDEDEEEEGTNTEAEHDATGSQAHGSSSFEVSKSQAAGHIKSRHREMAIGKQEAKEEAPGFTVYVNRRPTSMAEVINDLEAQFTTVCNAANDVSALLEAKKAQYLLPPNELSASKLLNPVALFRSASSRSTSSRFLMNCTSTIEEGCEGTKNITEEHCMVSGSHQTTLDRLNAWEKKLYEEVKSGERVRIAYEKKCKQLRNHEVKGDDPSSADKTRAAIRDLDTKITVSIHSVEAICRRIETLRDEELHPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKVLLAGTPSKSHARKHSSMSMTDPNRLARSASNLEFELRNWRNTFESWITSQRSYAHALTGWLLRCVRSESNDVSKLPCSPHRSSGTHPLFGLCVQWSRHLDAIHEKAVLDGLDFFAAGMGSLYAHQLRQDSRPRQTNGGMEMVEFGQVEEEVMAPEKLAEVAIKVLCAGMSVAMSSLAEFAFDSAEGYSEVIKQWENVKSQNTSSET* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2120 785 MobiDBLite consensus disorder prediction 261 309 - -
Lja6g2120 785 PANTHER UNCHARACTERIZED 1 785 - -
Lja6g2120 785 MobiDBLite consensus disorder prediction 245 260 - -
Lja6g2120 785 MobiDBLite consensus disorder prediction 312 332 - -
Lja6g2120 785 PANTHER DUF630 FAMILY PROTEIN 1 785 - -
Lja6g2120 785 Pfam Protein of unknown function (DUF632) 369 697 IPR006867 -
Lja6g2120 785 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lja6g2120 785 MobiDBLite consensus disorder prediction 245 354 - -
Lja6g2120 785 MobiDBLite consensus disorder prediction 334 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2120 Lja-Chr6 50069903 50074342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2120 445 704 Acyl Lipid Metabolism Gene Families AT2G27090 38.168 3.29e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2120 - - gmx:100780704 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2120 6 50069903 50074342 Lja6g2120 6 50069903 50074342 ECH
Lja4g1633 4 15338529 15341809 Lja6g2120 6 50069903 50074342 PCT