Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1633 ATGGGATGTTCTCAATCAAAATTGGATAATGAAGAGGCAGTTCAGCTTTGTAAGGATAGGAAGCGATTCATCAAACAAGCTGTCGAGCAAAGAACTCAATTCGCTACTGGTCACATAGCATACATCCAATCTCTGAAGAGAGTTTCAGCTGCACTGCATGATTACTTTGAAGGAGATGATAAGCAAGCTGAGTTATCATTAGATTCATTCATAACCCCTTTGAAGAGAACACTTGAGTTTGGACCCAATTCAACTATGAAAGTGAATTGTCTTAGGGCTGGTGGTAATCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCACCGGAAATGGTTCGAGTTGAAGCATATTCACCAATGCACCAGTTTGGTATTGATGGTTTCTTTACAATGCAATCCTCACCTGTGAATGCTTCAATTTTTGCTTATTCTCCCAATAACAGGCCAATTATCCCTTCACCACAACATTCCCAATGGGATTCCTTTTGGAATCCATTCACATCATTGGACTATTATGGTTACCCCATGGGAAATAGTCTTGACCACACTGTGGTGAATGATGATAGTAAAGGACTGAGGCAGGCCCGAGAAGATGAAGGAATACCAGACCTTGAAGAAGATGAAACTGAAAAAGAAGATTCTGTTGCAAAGAGAATTGTAGCAGAAGAAAAAACCAAAACTGACTCTTCCAAAGAAGAAGTCACAGTTGAAGATGTTGATGAACATGAGGAAGAGGAGGCAATAGGAGCTGAAACTAAAGCTGAGAATGGAATCTCAGATTCACAAGGCAATGCTAGTGAATGTTTCCAAGTATCAAAAGCTCAAAGTGCAGGTCATGTTGATTCCAGCCATCGGGAAATGGCAATTGGTAAGGAAGAAGCTAAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACAGAAGGCCAACAAGCATGGGGGAAGTGATAAAGGATCTTGAAGCTCAATTCACAGTAGTCTGCAATGCAGCTAGTGATGTCTCAGCACTGTTAGATGCCAATAAAGATCAGTATTTATCGACATCTAGTGAACTTTCAGCATCAAAATTGTTGAATCCAGTAGCTCTTTTCCGCTCTGCTTCTTCACACTCTTCGCCATCAAGATTTTTAACGAATTCTTCTAACACAAGGGATGAAGGTTACAAGAGTACTGATGATCCATTAATGGAACATTGTGCGTTATCTTCTAGTCATCAGTCAACATTAGACAGGTTATATGCATGGGAGAAGAAGCTCTACAAGGAAGTTAGGTCTGGAGCACGTGTTCGGCTTGCATATGAGAAGAAATGTCAGCAACTAAGGAACCGTGATGTAGAAGGAGAGGAACCCTCTTCTGTGGATAAAACAAGAGCTGCCATTAGAGATCTACAGACCCAGATAACAGTTTCAATGCACTCAATTGAAGCTATTTCCAAAAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGTTGCAACAGCTGGCACGGATGTGGAAAGTGATGGCGGAATGTCATCAGACACAGAAGATAGCCTTAGATGAAGCTAAGATTCTCCTAGCTTGCATTGAAGCTAAAAAACAGTGTGCCATGCCAATAGCTGATCCACAGAGGCTTGCTCGTTCATCCTCCAATCTTGAAATTGAGTTGAGGAATTGGCGAAACACCTTCGAGTCATGGATCAAATCTCAGAGATCCTACATTCATGCTCTAACCGGCTGGTTTCTCCGAGGTGTGAGATGTGAGCCTGAAGCATCGAAGTTAGCATGCTCTCCTCGAATGACCAGTGACTCTCACCCAATGTTTGGACTCTGTGTTCATTGGTCAAGGCGCCTAGATGCCATTCAAGAAACAGCAGTAGTTAATGGCATAGACTTTTTTGCAGCTGGTGTAGGGTCCCTCTATGCGCAACAGCTAAGAGAAGATTCTCGACGATCGAAAGAACCAAATGAGAAGAATATGGAAGTGGTGGAAGTTGGTCAAGTAGAAGAGGTGATGACTACTGAGCAAATGGCTGAGGTTGCTGTGAAGGTACTTTGTGCTGGAATGTCAAGTGCTATGAGCTCAATGGCAGAGTTTGCTATTGATTCTGCTAAGGGATACAATGAACTTGTTAAGCAATGGGAGAATGTGAAGTTGCAGCAGCATGCTTGTGAGACTGCAACATAG 2178 0.4219 MGCSQSKLDNEEAVQLCKDRKRFIKQAVEQRTQFATGHIAYIQSLKRVSAALHDYFEGDDKQAELSLDSFITPLKRTLEFGPNSTMKVNCLRAGGNPAISVEERPQSPEMVRVEAYSPMHQFGIDGFFTMQSSPVNASIFAYSPNNRPIIPSPQHSQWDSFWNPFTSLDYYGYPMGNSLDHTVVNDDSKGLRQAREDEGIPDLEEDETEKEDSVAKRIVAEEKTKTDSSKEEVTVEDVDEHEEEEAIGAETKAENGISDSQGNASECFQVSKAQSAGHVDSSHREMAIGKEEAKEETPGFTVYVNRRPTSMGEVIKDLEAQFTVVCNAASDVSALLDANKDQYLSTSSELSASKLLNPVALFRSASSHSSPSRFLTNSSNTRDEGYKSTDDPLMEHCALSSSHQSTLDRLYAWEKKLYKEVRSGARVRLAYEKKCQQLRNRDVEGEEPSSVDKTRAAIRDLQTQITVSMHSIEAISKRIETLRDEELHPQLLELLQQLARMWKVMAECHQTQKIALDEAKILLACIEAKKQCAMPIADPQRLARSSSNLEIELRNWRNTFESWIKSQRSYIHALTGWFLRGVRCEPEASKLACSPRMTSDSHPMFGLCVHWSRRLDAIQETAVVNGIDFFAAGVGSLYAQQLREDSRRSKEPNEKNMEVVEVGQVEEVMTTEQMAEVAVKVLCAGMSSAMSSMAEFAIDSAKGYNELVKQWENVKLQQHACETAT* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1633 725 MobiDBLite consensus disorder prediction 368 383 - -
Lja4g1633 725 PANTHER UNCHARACTERIZED 66 724 - -
Lja4g1633 725 MobiDBLite consensus disorder prediction 368 389 - -
Lja4g1633 725 MobiDBLite consensus disorder prediction 190 262 - -
Lja4g1633 725 Pfam Protein of unknown function (DUF632) 312 634 IPR006867 -
Lja4g1633 725 MobiDBLite consensus disorder prediction 210 235 - -
Lja4g1633 725 PANTHER DUF630 FAMILY PROTEIN 66 724 - -
Lja4g1633 725 PANTHER DUF630 FAMILY PROTEIN 1 73 - -
Lja4g1633 725 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lja4g1633 725 PANTHER UNCHARACTERIZED 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1633 Lja-Chr4 15338529 15341809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1633 1 707 Acyl Lipid Metabolism Gene Families AT2G27090 27.785 3.02e-58 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1633 - - gmx:100818631 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1633 4 15338529 15341809 Lja4g1633 4 15338529 15341809 ECH
Lja4g1633 4 15338529 15341809 Lja6g2120 6 50069903 50074342 PCT