Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2105 ATGGGAGGGTGTTTTTCTTGTAGATCATCCTCCAAGAACTCCAAATCAAACAGTGTTAGACTAGTTCATCTCAGTGGCTATGTAGAGGATTTTGAGCAACCAATTTCAGTGAGTCAAGTCACTGGAAACAGTGGAAACCCCACAAGTCATTTTGTTTGCACTTCTGTTCAGCTTCTTTCCTCTTGCTCAAAATCACTTAAGGGAGACACACAACTCCAACCAGGGAATGTGTACTTCATGCTTCCATACTCAATTCTTCAACCTGATGTTTCTCCTGTGGATTTGGCTTCCCTTGCAAAGAGGCTCACATCAATAGCCAAAACAAGAAGAAGATCATGTGATGAGGACAAAAAGTCCTTGAAGGCTAGTCCTTTGGCTAGTCAAATTGGGTTGAGCAATGTTTGGAGTTCACCTTCTAGGAGCCCTGGCAGAGTTGGTGTGGCTGAGGAAATTGGACTGGCTTATGGAGGAAGAAGTGTTTCTGGAGTGAGGCCATGGAAACCTATCTTGGGCACTATTAGGGAGAAGTCACTCAATAGGAGAAGTGAGTCAGATTTGCTAGAAAATCGTTGA 573 0.4363 MGGCFSCRSSSKNSKSNSVRLVHLSGYVEDFEQPISVSQVTGNSGNPTSHFVCTSVQLLSSCSKSLKGDTQLQPGNVYFMLPYSILQPDVSPVDLASLAKRLTSIAKTRRRSCDEDKKSLKASPLASQIGLSNVWSSPSRSPGRVGVAEEIGLAYGGRSVSGVRPWKPILGTIREKSLNRRSESDLLENR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2105 190 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 186 - -
Lja6g2105 190 PANTHER OS06G0700300 PROTEIN 1 186 - -
Lja6g2105 190 Pfam PADRE domain 1 175 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2105 Lja-Chr6 49668159 49669684 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2105 - - gmx:100810460 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2105 6 49668159 49669684 Lja6g2105 6 49668159 49669684 ECH
Lja4g1629 4 15265148 15266098 Lja6g2105 6 49668159 49669684 PCT