Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1629 ATGGGTGCCTGTTTATCTCTTAAGTCATCTTCCACCTTCAAGAATGTGCGAGTGGTTCATCTCAATGGTTATGTAGAGTATTTTGAGCAACCCATTTCAGCAAGCCAAGTAATTGACACCCCCGAAAAACACTTTGTTTGCACCTCCTTTCAGCTTCTTTCCTCAACACCATTCAAGGGAGATACCCAACTCCAACTTGGGCAAGTGTATTTCATGCTCCCATACTCAATGTTCCAAACTGAGTTTTCCCCTATGGATTTGGCTTGCCTAGCAAAGAGGCTCACTGCAATAGCCAAAACCAGGTCATGTAATTCTGACTCAAAAAAACTCAGGAGTCCTTGCAGAGTCGCCGTGGCTGAGAAAGTTGGTGTGAATATGATGAATGGGGGACGAAGCCCTTGTAGGTTGAAAACATGGAAACCTGTCTTGGACACTATCACAGAAAAGTCATTCCATAGCAATAGGAGTTGTGAATCAGTTTTGTATGAGAAAAATTAA 498 0.4277 MGACLSLKSSSTFKNVRVVHLNGYVEYFEQPISASQVIDTPEKHFVCTSFQLLSSTPFKGDTQLQLGQVYFMLPYSMFQTEFSPMDLACLAKRLTAIAKTRSCNSDSKKLRSPCRVAVAEKVGVNMMNGGRSPCRLKTWKPVLDTITEKSFHSNRSCESVLYEKN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1629 165 Pfam PADRE domain 1 148 IPR025322 -
Lja4g1629 165 PANTHER OS06G0700300 PROTEIN 1 157 - -
Lja4g1629 165 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1629 Lja-Chr4 15265148 15266098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1629 - - gmx:100785670 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1629 4 15265148 15266098 Lja4g1629 4 15265148 15266098 ECH
Lja4g1629 4 15265148 15266098 Lja6g2105 6 49668159 49669684 PCT