Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2079 ATGTTTAGCTTCTTAATTAGGAAAGATGCCAGAAAGATTCTCAAGCGCAAAGACAGTGATGCTGGTGAAAAAGGAAGAGCTTTGGAAGAATTGAGAGCCTCTCTCTTTAATCGATTCCGATCCCCTGAAGGTGCTAAGCGTCAACAACAGCGTACATGTGGTCCAGCTATTGCACTTTCCTTCAATTTTCTGGTTGCTGTTGGCATTATTTTCATGAACAAAATGGTGCTTCAAACTATTAAATTCAAATTCCCTATATTTCTTACATTGATTCACTATGGAGTGAGCTGGTTCTTTATGGCTGTACTAAAAGCATTTTCTTTCCTTCCTGCACCTCCTTCCTCGAAATCAACTCGAATGTCCACTTTGTTTTCTCTTGGATTTGTTATGTCTCTATCTACTGGCTTTGCTAATGTCAGCTTGAAGTATAATAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTGACACCATCAATAGTTTTGGCAGAATTTGTATTGTACAGTAAGAAAGTTTCTTTGCCTAAGACATTAGCATTGACGGTGGTATGTATTGGTGTTGCCGTGGCTACTGTCACTGATCTGCAGTTCCATTTATTTGGTGCTTGTGTAGCATTGGCATGGATTGTACCAAGTGCTGTAAACAAAATCCTTTGGTCTAGATTGCAGCAGCAAGAGAACTGGACAGCATTGTCGCTGATGTGGAAAACAACACCTATTACTTTGATTTTCCTGGCTGCTATGTTACCCGGCTTGGACCCTCCAGGTGTACTCTCCTATGATTGGAACTTAAGCAACTCCTTGGTGATTTTTGCATCAGCCATTCTTGGATTTTTGCTTCAGTGGTCGGGTGCTTTAGCACTAGGTGCTACATCTGCCATCTCACACGTTGTTCTTGGGCAGTTTAAGACATGCGTCCTTCTGCTAGGTAACTATTATCTCTTTGGATCCAATCCTGGCACAATCAGTATATGCGGTGCATTCACAGCTATCGCCGGCATGTCTGTTTTCACCTACCTTAATCTGAAGCAACAAACAAACAAGACATCTCCTCGACAAACTTCCTCCACATTACCAAAATCTAAACTTGGCAAAGAAAATGGCAGCACCCATGAGGGACATTATGGGACAGAGTCTGTCTAA 1143 0.4173 MFSFLIRKDARKILKRKDSDAGEKGRALEELRASLFNRFRSPEGAKRQQQRTCGPAIALSFNFLVAVGIIFMNKMVLQTIKFKFPIFLTLIHYGVSWFFMAVLKAFSFLPAPPSSKSTRMSTLFSLGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVLAEFVLYSKKVSLPKTLALTVVCIGVAVATVTDLQFHLFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPITLIFLAAMLPGLDPPGVLSYDWNLSNSLVIFASAILGFLLQWSGALALGATSAISHVVLGQFKTCVLLLGNYYLFGSNPGTISICGAFTAIAGMSVFTYLNLKQQTNKTSPRQTSSTLPKSKLGKENGSTHEGHYGTESV* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2079 380 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 15 356 - -
Lja6g2079 380 Pfam Triose-phosphate Transporter family 62 336 IPR004853 -
Lja6g2079 380 MobiDBLite consensus disorder prediction 348 364 - -
Lja6g2079 380 MobiDBLite consensus disorder prediction 348 380 - -
Lja6g2079 380 PANTHER SOLUTE CARRIER FAMILY 35 15 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2079 Lja-Chr6 49275065 49279224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2079 67 363 Organic Solute Cotransporters AT1G77610 25.243 5.20e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2079 - - lja:Lj6g3v1313070.1 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2079 6 49275065 49279224 Lja6g2079 6 49275065 49279224 ECH
Lja4g1600 4 14968993 14973916 Lja6g2079 6 49275065 49279224 PCT