Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1600 ATGTTTAATTTCTTAATGAGTAAACAGGTCCGAAAGATTCTCAAGCGCAAAGACAGTGATGCTGGTCAAACAGGAAAAGCATTGGAAGACTTGAGAGGCTCTCTGTTCAATGAATTTCGTACCGTTGAAGGTGCAAAACGTCAACAACAGCGTACGTGTGGTCCAGCTGCAGCACTTTCCTTCAATTTTCTGGTTGCAGTTGGTATTATTTTCATGAACAAAATGGTGCTTCAAACTGTCAAATTCAAATTCCCGATATTTCTCTCACTAATTCACTATGTTGTGAGCTGGTTCTTAATGGCTCTACTAAATGCATTTTCTTTCCTCCCTGCATCTCCTTCCTCAAAAACTCCGCTGTCTGCTTTATTTACTCTTGGATTTGTTATGTCTCTATCTACTGGCCTTGCTAATGTCAGCTTGAAGTATAATAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTAACACCTTCAATAGTTATGGCAGAATTTGTTTTGTACCGGAAGAAAGTTTCTTGGCCGAAGGCTATTGCATTAACGGTCGTATCTATTGGTGTTGCTGTGGCTACAGTGACTGACCTGCAGTTCCATGTGTTTGGTGCCTTTGTAGCACTGGCGTGGATTGTACCTAGTGCTGCTAACAAAATCCTCTGGTCCCGACTGCAGCAGCAAGAGAACTGGACAGCTTTGGCGTTGATGTGGAAAACAACACCTATTACTTTAATTTTCCTGGTTGCTATGTTACCCTACTTAGACCCTCCAGGTGTACTATCCTTTGATTGGAACTTCAACAACACACTGGTGATTCTTATATCTGCTATTCTTGGATTTTTGCTTCAATGGTCTGGTGCTTTAGCACTGGGTGCTACGTCCGCCATCTCGCATGCTGTTCTTGGGCAATTTAAGACGTGTGTACTCCTCCTGGGAAACTATTATCTTTTTGGGTCGAATCCCGGCATAATCAGTATCTGTGGAGCAGTTACAGCCATTACCGGCATGTCTGTTTATACTTGTCTTAATCTGAAGCAGCAATCAAACAAGATATTTCCTCAACAGGTCTCCCATGTAGCAAAATCTAAACTTAGCAAAGAAAATGGCAGTTCCCAAAATGGACATTACGGTGCAGAATCCGTCTAA 1137 0.4204 MFNFLMSKQVRKILKRKDSDAGQTGKALEDLRGSLFNEFRTVEGAKRQQQRTCGPAAALSFNFLVAVGIIFMNKMVLQTVKFKFPIFLSLIHYVVSWFLMALLNAFSFLPASPSSKTPLSALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFVLYRKKVSWPKAIALTVVSIGVAVATVTDLQFHVFGAFVALAWIVPSAANKILWSRLQQQENWTALALMWKTTPITLIFLVAMLPYLDPPGVLSFDWNFNNTLVILISAILGFLLQWSGALALGATSAISHAVLGQFKTCVLLLGNYYLFGSNPGIISICGAVTAITGMSVYTCLNLKQQSNKIFPQQVSHVAKSKLSKENGSSQNGHYGAESV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1600 378 Pfam Triose-phosphate Transporter family 63 336 IPR004853 -
Lja4g1600 378 MobiDBLite consensus disorder prediction 359 378 - -
Lja4g1600 378 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 15 355 - -
Lja4g1600 378 PANTHER SOLUTE CARRIER FAMILY 35 15 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1600 Lja-Chr4 14968993 14973916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1600 67 345 Organic Solute Cotransporters AT1G77610 24.567 2.38e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1600 - - gmx:100777883 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1600 4 14968993 14973916 Lja4g1600 4 14968993 14973916 ECH
Lja4g1600 4 14968993 14973916 Lja6g2079 6 49275065 49279224 PCT