Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2051 ATGAGCAACAACAACACCAACAACTTCAACATGGCAGATCTCACTTCAGCTCTCAACGAAGAGAATCAAGCTGACCTAGTCAATGCACTCAAGAGCAAGATACAGAGTCTGGCTGGGATTTACTCTGATGTTCTGGAGAGTCTTGAACCTAATGTCAGGAAGAGAGTTGAAGTTCTCAGGGAGATTCAGGGGCAACATGATGAATTTGAGGCGAAGTTTTTAGAGGAGAGAGCAGCTCTTGAAGCCAAATACCAAAGCTTGTATCAACCGTTGTACACAAAGCGCTTTGAAATAGTGAATGGTGTTACTGAAGTGGAGGGGGGAGCAGATGAACCGGCAGCTAAAGAGAAAGGAGTGCCTTCTTTTTGGCTCAATGCAATGAATAATAATGATGTTTTAACTGAAGAGATTTCTGAGCATGATGAAGGTGCTCTCAAGTTTCTTAAAGATATCAAGTGGAGCAGGATAGATGACCCTAAAGGATTCAAACTTGAGTTTTTCTTTGATTCCAATCCGTACTTTTCAAACTCTGTCTTGACTAAAACATATCATATGATTGATGAGGATGAACCTATATTGGAGAAAGCAATTGGGACGGAAATTGAATGGTACCCTGGAAAAAATTTGACCGAGAAGGTTCTGAAGAAAAAGCCTAAGAAGGGTGCTAAGAATGCTAAACCAATTACCAAAACTGAAAAATGTGAAAGTTTCTTCAATTTTTTCAGTCCACCTGAAGTCCCTGATGATGATGATGACATTGATGCAGATATGGCTGAGGAGCTTCAGAATCAGATGGAACAAGATTATGACATTGGGTCCACAATAAGAGACAAGATTATCCCCCATGCTGTATCATGGTTTACTGGGGAGGCCCTTCAGGGAGATGAGTTTGAAGATCTCGAGGATGAAGAAGATGACGATGAAGATGACGAAGAGGATGATGATGAAGATGATGATGACGATGATGAAGATGAGGAAGAGCTTAAGACTAAAAAGAAGCCATCCCCAAACAAGAAGGGTGGAAAAGCACAGCTTGGCGATGGTGGTGAGCGGCCTCCAGAGTGCAAGCAGCAGTAG 1077 0.4206 MSNNNTNNFNMADLTSALNEENQADLVNALKSKIQSLAGIYSDVLESLEPNVRKRVEVLREIQGQHDEFEAKFLEERAALEAKYQSLYQPLYTKRFEIVNGVTEVEGGADEPAAKEKGVPSFWLNAMNNNDVLTEEISEHDEGALKFLKDIKWSRIDDPKGFKLEFFFDSNPYFSNSVLTKTYHMIDEDEPILEKAIGTEIEWYPGKNLTEKVLKKKPKKGAKNAKPITKTEKCESFFNFFSPPEVPDDDDDIDADMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEALQGDEFEDLEDEEDDDEDDEEDDDEDDDDDDEDEEELKTKKKPSPNKKGGKAQLGDGGERPPECKQQ* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2051 358 Gene3D - 46 105 - -
Lja6g2051 358 Gene3D Nucleosome assembly protein 114 290 - -
Lja6g2051 358 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 358 - -
Lja6g2051 358 Pfam Nucleosome assembly protein (NAP) 54 290 IPR002164 GO:0005634|GO:0006334
Lja6g2051 358 SUPERFAMILY NAP-like 31 289 IPR037231 -
Lja6g2051 358 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 358 IPR002164 GO:0005634|GO:0006334
Lja6g2051 358 MobiDBLite consensus disorder prediction 289 358 - -
Lja6g2051 358 MobiDBLite consensus disorder prediction 294 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2051 Lja-Chr6 48962331 48966173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2051 K11279 - gmx:100818687 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2051 6 48962331 48966173 Lja6g2051 6 48962331 48966173 ECH
Lja4g1564 4 14616435 14619583 Lja6g2051 6 48962331 48966173 PCT