Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1564 ATGAGCAACGACAGAGACACCTTCAACATTTCTGATCTCACCTCTGCTCTCAATGAGGAGAACAAAGCAGACCTTGTCAATGCTCTCAAGAGCAAGATTCAAAGTCTTGCTGGGCAGCACTCTGATATTCTAGAGTCCCTTTCACCAGTTGTCAGAAAGAGAGTTGACATTCTCAGAGAGATCCAGGGTCAACATGATGAATTAGAGGCAAGTTTTTTTGAGGAGAGAGCAGCACTTGAGGCAAAATACCAAAAGCTGTATCAACCTCTTTACAGCAAGCGCTATGACATTGTCACTGGTGTTGCGGAAGTTGAAGGAGTGGAAAAGGAAACCTCCCCTGATACAGAAGAGAGTAAAGAGAAAGGAGTGCCTGACTTTTGGCTCACTGCAATGAAGAATAATGAAGTGTTAGCTGAGGAGATTTCGGAGCGTGATGAAGCTGCTCTCAAGTATCTCAAAGATATCAAGTGGTTCAGGGTAGAAGACCCGAAAGGATTCAAGCTTGAGTTTTACTTTGATACCAATCCTTATTTCACAAATACTGTCTTGACTAAAACATACCACATGATTGATGAGGATGAACCTATATTGGAGAAGGCAATTGGGACCGACATTCAATGGCACCCAGGCAAATGTTTGACACAGAAGATTCTTAAGAAAAAACCTAAGAAAGGTTCAAAGAATGCTAAGCCAATTACCAAAACTGAAGACTGTGAAAGTTTCTTCAATTTTTTCAGTCCACCACAAGTTCCTGAAGAAGATGAAGACATCGATGAAGATATGGCTGAGGAACTTCAGAATCAGATGGAGCAAGACTATGATATTGGGTCGACAATAAAAGACAAGATAATTCCCCATGCTGTATCATGGTTTACTGGGGAGGCCAATCAGGGAGAGGAGTTTGGAGAATTGGATGAGGATGAAGATGACGATGATGATGATGAAGATGAGGATGATGATGAGGAGGATGAGGAAGATGAGGAAGAAAGCAAGCCTAAAATGGAGTCATCTGCACATAAGAAGGGTGGAAGAGCTCAGCTTGGTGATGGTCCTCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1089 0.4298 MSNDRDTFNISDLTSALNEENKADLVNALKSKIQSLAGQHSDILESLSPVVRKRVDILREIQGQHDELEASFFEERAALEAKYQKLYQPLYSKRYDIVTGVAEVEGVEKETSPDTEESKEKGVPDFWLTAMKNNEVLAEEISERDEAALKYLKDIKWFRVEDPKGFKLEFYFDTNPYFTNTVLTKTYHMIDEDEPILEKAIGTDIQWHPGKCLTQKILKKKPKKGSKNAKPITKTEDCESFFNFFSPPQVPEEDEDIDEDMAEELQNQMEQDYDIGSTIKDKIIPHAVSWFTGEANQGEEFGELDEDEDDDDDDEDEDDDEEDEEDEEESKPKMESSAHKKGGRAQLGDGPQGERPPECKQQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1564 362 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 362 - -
Lja4g1564 362 MobiDBLite consensus disorder prediction 294 362 - -
Lja4g1564 362 MobiDBLite consensus disorder prediction 299 330 - -
Lja4g1564 362 Gene3D Nucleosome assembly protein 118 294 - -
Lja4g1564 362 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 362 IPR002164 GO:0005634|GO:0006334
Lja4g1564 362 Pfam Nucleosome assembly protein (NAP) 53 294 IPR002164 GO:0005634|GO:0006334
Lja4g1564 362 SUPERFAMILY NAP-like 30 293 IPR037231 -
Lja4g1564 362 Gene3D - 45 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1564 Lja-Chr4 14616435 14619583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1564 K11279 - gmx:100818687 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1564 4 14616435 14619583 Lja4g1564 4 14616435 14619583 ECH
Lja4g1564 4 14616435 14619583 Lja6g2051 6 48962331 48966173 PCT