Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2006 ATGGGTCGAACCAAAACCACCGCAAAACCCGACCCCCTCACCGAACCCGCTTCTCCCCTTTCCCTTCCTCCGCCGCTTCGCAGACGGAGCCTCCGCCTCTCACCCGCTCCCAATTCCGAACCTCCCGCCGCCACTAGGGTTTCCACCGCCAAGGGGAAGAAAAACCCCAAAACGATGTCGTCTAACGGCGATGAAGATGGTAATAAAATTGGAAAGGGTTTTCTCAACTTGCGTTCTGGCAAGAAGGTTCTCAAGCGAGGAGAAACCACCACCACAACCACCACCGCCGCCGATGATGATGATGATGATTCACTGGGAAGCAGTAAGAAAAGGAAAATCGAAGAAGAGGAACAAACCGATGAAGGGGGAAATGACGAGTTAACCGCCGGGAAGAGTCATGTTGATGATGAAGGTGAAGGAGAAGGAGAAGGAGAATCAAGTCAAAGGAAACCACCACCACTCAGCAGAGAAGAGAAAGGGAAGACTATACTGGTTGTGGAGAACAAAGAAGAAGAAGATGAAGAATCCATAATGGAGGTAAACAACTTTGTTATAAACGATTCACCGGTATCTGTTCCAATTCCAGTTCCTGTGCCAGTTCCAGAACAAGCTAGAAACTCTGCCGCGGCGAGAGAAAACGGTGCCAGGAGGAACGAGGTAATGGAACGCTTCCGTGACATAGCGAGGGAAAATGCGTCTCGTTTCGCGCATTTTGCATCGGACGGAGAAGATGATGATGGTGACCGTTCATCTGTGGAGCCTGAAGAGGAGCTTGAGAATGAGGATTGGCCTGGTCCGTTCTCAACTGCCATTAGGATTATCAGGGATCGAGAGAACAAGGGCGACATTCAGACGGGTTTCGCTGCTTCTTCCCAGGCTAGCTTGATCGATTCAATCAAATGGGTTCCTAGAACAACGAGTTCGGAGGAGCGCGAGGATGCCACCGCGAGGTTTAATGTCCCGTCGTTGCAGGAGATGTGCTTACAAATTCTGTCCAGGAATGTTGATGCCATTGTGTCGCTTGAGAGTGTACCGGATGCTCTGAGGCACAGGCTTAGCCACTTGTTGTGTGACTCCAGAAGGATCAATGACCACTTTCTTGAGCTGCTCGTTGGTGGTGCTCCCACGGAGATTCGGCTGAGAGATTGCTCGTGGCTGTCGGAGGAACATTTTACCAAGTGCTTTCAGACTTGTGACACTACGAATTTGTTGGTACTGCAACTTGACCAATGTGGGCGCAGTTTGGCAGATTATGTAATAGTTGCTACTCTGGCACAGTCACCGAGGCAGTTGCCTAGATTAGTTAGTCTATCCGTGAGTGGTGCATGCCGTCTTTCAAATGTGGGCTTGCGTGCACTCATTTCTTCTGCTCCAGAACTTAGATCACTCAATCTCAACCTGTGCTCGCTTCTCACATCTGATAGTATTGATATTATAGCTGAATCATTAAAATCTGTTCTGAAAGAGTTGTACCTTGATGATTGCCAAGGCATGAGTGCTGCACTGGTCGTGCCAGCACTGGTGAAGCTTGAACATTTAGAAGTGTTGTCAGTAGCTGGTATTCAAACCTTTAGTGATAAAATTCTCAAGGATTACATTATTGCACGTGGTCACAACCTGAAAGAGCTTGTTCTGAAAGGCTGTATAAACTTGACTGACCGCTCAATCAAAGTCATTGCTGAACACTGCCCTGGATTATGTGTTCTTGATCTTATGAACTTGGGCAAATTAACAGATTTGTCTATAGGATATCTTACTAAAGGTTGTCGCTCACTTCATACACTGAAGCTTTGCCGTAATCCATTCAGTGATGAAGCAATTGGTGCATTTGTGGAGACCTCTGGAGAGTCATTGAAAGAACTGTCGCTTAATAACATTAAGAAGGTTGGTTACCACACAGCCATATCACTTGCAAGACATGCAAAAAATTTGCATACTCTTGATCTATCTTGGTGCCGAAATTTGTCAGACAATGCGCTGGGTTTTATAGTAGATAGCTGCTTGTCGCTGAAGTTACTTAAACTTTTTGGATGCACTCAGGTAACAGATGTTTTTGTTAAGGGCCACTCAAATATGCAGATCCAGATAATTGGTTTGAAGATGTCTCCTGTTTTGCAACATGTGAAAGTGCCGGATCCTCATCAAGCTGCTTTGAATTATTCCTCAGTCACAGTTGATTTAGTATAG 2187 0.4646 MGRTKTTAKPDPLTEPASPLSLPPPLRRRSLRLSPAPNSEPPAATRVSTAKGKKNPKTMSSNGDEDGNKIGKGFLNLRSGKKVLKRGETTTTTTTAADDDDDDSLGSSKKRKIEEEEQTDEGGNDELTAGKSHVDDEGEGEGEGESSQRKPPPLSREEKGKTILVVENKEEEDEESIMEVNNFVINDSPVSVPIPVPVPVPEQARNSAAARENGARRNEVMERFRDIARENASRFAHFASDGEDDDGDRSSVEPEEELENEDWPGPFSTAIRIIRDRENKGDIQTGFAASSQASLIDSIKWVPRTTSSEEREDATARFNVPSLQEMCLQILSRNVDAIVSLESVPDALRHRLSHLLCDSRRINDHFLELLVGGAPTEIRLRDCSWLSEEHFTKCFQTCDTTNLLVLQLDQCGRSLADYVIVATLAQSPRQLPRLVSLSVSGACRLSNVGLRALISSAPELRSLNLNLCSLLTSDSIDIIAESLKSVLKELYLDDCQGMSAALVVPALVKLEHLEVLSVAGIQTFSDKILKDYIIARGHNLKELVLKGCINLTDRSIKVIAEHCPGLCVLDLMNLGKLTDLSIGYLTKGCRSLHTLKLCRNPFSDEAIGAFVETSGESLKELSLNNIKKVGYHTAISLARHAKNLHTLDLSWCRNLSDNALGFIVDSCLSLKLLKLFGCTQVTDVFVKGHSNMQIQIIGLKMSPVLQHVKVPDPHQAALNYSSVTVDLV* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2006 728 MobiDBLite consensus disorder prediction 41 65 - -
Lja6g2006 728 Gene3D Ribonuclease Inhibitor 613 712 IPR032675 -
Lja6g2006 728 MobiDBLite consensus disorder prediction 235 264 - -
Lja6g2006 728 MobiDBLite consensus disorder prediction 1 176 - -
Lja6g2006 728 MobiDBLite consensus disorder prediction 246 262 - -
Lja6g2006 728 PANTHER F-BOX/LRR PROTEIN 166 722 - -
Lja6g2006 728 SUPERFAMILY RNI-like 379 684 - -
Lja6g2006 728 Gene3D Ribonuclease Inhibitor 533 612 IPR032675 -
Lja6g2006 728 PANTHER UNCHARACTERIZED 166 722 - -
Lja6g2006 728 Gene3D Ribonuclease Inhibitor 314 532 IPR032675 -
Lja6g2006 728 SMART LRR_CC_2 563 588 IPR006553 -
Lja6g2006 728 SMART LRR_CC_2 641 666 IPR006553 -
Lja6g2006 728 SMART LRR_CC_2 537 562 IPR006553 -
Lja6g2006 728 SMART LRR_CC_2 457 482 IPR006553 -
Lja6g2006 728 SMART LRR_CC_2 667 688 IPR006553 -
Lja6g2006 728 SMART LRR_CC_2 615 640 IPR006553 -
Lja6g2006 728 SMART LRR_CC_2 589 613 IPR006553 -
Lja6g2006 728 SMART LRR_CC_2 431 456 IPR006553 -
Lja6g2006 728 MobiDBLite consensus disorder prediction 196 217 - -
Lja6g2006 728 MobiDBLite consensus disorder prediction 102 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2006 Lja-Chr6 48037240 48042292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2006 K15082 - gmx:100808150 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2006 6 48037240 48042292 Lja6g2006 6 48037240 48042292 ECH
Lja4g1518 4 14146564 14151262 Lja6g2006 6 48037240 48042292 PCT