Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1518 ATGGAAGCGATTGAAGGTGGCTTGCTGAAGAAGATTGCGTGGGTTTCCAGAAAGAAACCGCAAGATGTTAGAGTTTCAGTCCCGTCATTGTTAGAGTTGAGCATGAAAACTCTTGCTGATAATGCTGATTCGATTGTTTCACTTGGAAGTGCACCGGATCACCTCAGGCACAGGCTGAGCCAATTGCTGTGTGACTCTAGAAGAATTAACAGCAGATTCTTGGAGCTTCTTGTTAGGGGGTCTCCCACGGAGATTCGCATTCGAAATTGCTCGTGGTTGACGGAGGAGGAATTTACAAGATGTTTTCAGTCTTGTGACCTTAACTATTTGGAGGTGCTACAACTTGACCAGTGTGGACGATGTGTATCTGATTATGTATTACCTGCTACTTTGGCAAAATCACCAAGGTGTATGCCCAGAGTAATTAGTCTATCCTTCAGTGGTGCATGTCGTCTTACAGATAGAGGATTGCGTCAACTAGTTTCCTCTGCTCCTGCACTTAGATCCATAAATCTAAGCCAGTGCGCCCTTCTCACACCTGCCAGTCTTAATATTTTGGCTGATTCATTAGGGTCACTTCTAAAAGAGTTGTATCTTGAGGACTTCCAACTCACTAATGCAGTGCAAATTTTGCCAGCACTGAAGAAACTTAAACAGTTAGAAGTGTTATCATTGGCTGGCATTCAAGCAGTGAGTGATCAATTTATCAAAGATTACATCATTGTACAGGGTCACAACATGAAGGAGCTTGTGTTAAAGAACTGTATAAATTTGACTAATGCCTCAGTGCAAGCCATTGCTGAACAATGTCCCGGGTTGCAGGCACTTGATCTTACGAACTTGTGCAAGTTGACAGATTTATCTATAGAATATCTTACAAATAATTGTCAAGAACTGCGTATATTGAAGCTATGCCGCAATCCATTCAGCGACGAAGCAATTGCTTCATTTTTGGAGATCATTGGAAGGTCTTTGGAAGAACTTTCACTCAATAGCATCAGGAAGGTTGGCCAACACACAGCCTTATCACTTGCAAGGAATGCCAGAAATTTGCATACTCTAGATCTTTCATGGTGTCGAAATGTGAGTGATGAAGAGTTAGGTTTAATAGTAGACAGCTGCTTCTCTCTCAAGTTACTTAAACTTTTTGGATGCTCACAGGTAACAAGCATTTTTTTGGATGGGTACTCAAACCCAAGGATCCAAATCATTGGGTTGAAGCTCACTCCTTTATTGCAACGTATCGAAGTGTTTGAACATCCTCAAGGTGCTTTGCGTTATTCATCAGTCTCATTCAATGATTAA 1305 0.4161 MEAIEGGLLKKIAWVSRKKPQDVRVSVPSLLELSMKTLADNADSIVSLGSAPDHLRHRLSQLLCDSRRINSRFLELLVRGSPTEIRIRNCSWLTEEEFTRCFQSCDLNYLEVLQLDQCGRCVSDYVLPATLAKSPRCMPRVISLSFSGACRLTDRGLRQLVSSAPALRSINLSQCALLTPASLNILADSLGSLLKELYLEDFQLTNAVQILPALKKLKQLEVLSLAGIQAVSDQFIKDYIIVQGHNMKELVLKNCINLTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNNCQELRILKLCRNPFSDEAIASFLEIIGRSLEELSLNSIRKVGQHTALSLARNARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSIFLDGYSNPRIQIIGLKLTPLLQRIEVFEHPQGALRYSSVSFND* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1518 434 Gene3D Ribonuclease Inhibitor 205 321 IPR032675 -
Lja4g1518 434 Gene3D Ribonuclease Inhibitor 322 417 IPR032675 -
Lja4g1518 434 PANTHER UNCHARACTERIZED 9 429 - -
Lja4g1518 434 SUPERFAMILY RNI-like 84 402 - -
Lja4g1518 434 Gene3D Ribonuclease Inhibitor 79 193 IPR032675 -
Lja4g1518 434 PANTHER F-BOX/LRR PROTEIN 9 429 - -
Lja4g1518 434 SMART LRR_CC_2 138 163 IPR006553 -
Lja4g1518 434 SMART LRR_CC_2 322 347 IPR006553 -
Lja4g1518 434 SMART LRR_CC_2 244 269 IPR006553 -
Lja4g1518 434 SMART LRR_CC_2 270 295 IPR006553 -
Lja4g1518 434 SMART LRR_CC_2 296 320 IPR006553 -
Lja4g1518 434 SMART LRR_CC_2 164 189 IPR006553 -
Lja4g1518 434 SMART LRR_CC_2 348 373 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1518 Lja-Chr4 14146564 14151262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1518 K15082 - gmx:100798274 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1518 4 14146564 14151262 Lja4g1518 4 14146564 14151262 ECH
Lja4g1518 4 14146564 14151262 Lja6g2006 6 48037240 48042292 PCT