Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1990 ATGGAGGAGGAATTTTCCAATGCGGTGGAGGAGGGGCTGAGGCTCTCCAAGAGGGTATACTTCGGCAATGACAGGGCGGTTTCTCCTCCCAAACCTCCAATGGCGATGATCAAGTCCCACACCGCTTGGCTTCCAACCGCACCCATGCTCTACGCGCGAATTCACGACCCTGCCATCGTTGACAACCCTGATGTCCCTAGCTACCAGCCTCACGTGCATGGCAGGTGCGACCCGCCCGCGCTCATTCCCCTTCACATGACTGCCGTTAACCTCCGTGCCGATTGCTACCTCGATCACACCGCCTTCCTCACGCTCACCGCCTCCTGGAGGCTACATTGCGTCTCCGGCAGCCGTGCCGCCGATTGCCTCCTCGCCCTTCCCATGGCCGCTCAGGGTTCAATTCTAGGTGTGGAGGTTAGTGTTCATAGAAAATCTTTTTCTACTCAACTGGTTGATATGGAAGACAACAATGGCAAGGAGAATGTGACAAGAACTCAAGATGGAGGCTTTCTTAAGCCTGATGCGTTTACTTTGACTATACCGCAGATAGACGGAGGTTCAAATTTATCAGTTAAAATTAGTTGGTCTCAGAAGATACAATGCAGCAATGATGTGTTCTCCTTGAATGTGCCATTTGTCTTTCCTGATTATGTCAACCCTGTAGGGAAGAGAATATCAAAAACAGAAAAGATACAAATAAATGTGAATACTGTTACCGGTAGTGAGGTTCTTTGCAACACAACCAGCCATCCCCTGAAGGAAGTGAGGCGCAATGCTGGGGATATTGGTTTCTCATATGAATCTAATGTTCTCTCATGGTCAAAAAATGATTTTAGCTTTTCATATGCTGTTTCTTCAAGTCAAATAAACGGTGCTGTTTTTTTGGAATCTGCATCTGTGGATGATTTTGATCAGAGAGAGATGTTCTGCATGTACCTTTCTCCTGGAAATCTTCGGAGTAGGAAGGTATTCAGAAGAGACATCGTATTTGTTATTGACATAAGTGGAAGCATGCGGGGAAAGCTAATTGAAGACACAAAGAATGCACTATCAGCTGCACTCTCTAAGCTTGACCCTGAGGATTCATTTAGTATTATAGCATTTAATGGAGAGAGATATCTATTTTCAACATCAATGGAATTGGCCTCAAAGGATGCTGTTGAAAGGGCTATTGAGTGGATTAATATAAACTTTGTTGCAGGGGGTGATACAAATATTTTGCAACCCTTAAACAAGGCAATGGAAATGCTATCTGATGCTCGAAGTTCAGCTCCAATTATTTTCCTAGTTACAGATGGAAGTGTTGAAAATGAGAGACAAATTTGTGATATGGTAAAGAACCACATGATCAATGGCAAGTCAACAGCCCCTCGAATTTACACTCTTGGCATAGGTTCATTTTGCAATCACTACTTCTTGCGGATGCTTGCTATGATTAGTAGGGGTCAACATATTGCAGCATTGGATCCTCAAATGCTAAAATTGTTTGACAAAGCTTCATCTCTTGTTCTTGCAAATATCACAATGGACATATTCAATGATGTGGATGAAGTTGAGGTGTGTCCTTCCCCGATTCCAGATCTTTCGTCAGATGGTCCATTGGTTATATTCGGAAGATACAAGGGAAGTTTTCCCGAAGTTATTGAAGTTAAAGGTGTCTTGGCTGATTTCAGTAGTTTTATAACAGATATGAAGATACAAAAGGCTAAGGACATACCTATACAAAGGGTTTCTGCAAGAGATCAAATAGAGTATCTTACTGCTCAAGCATGGCTTTCAAATGATAAACAGTTAGAACAGAAGGTTGCAAAACTGAGCTTACAAACTGGCTTTACGTCCGAGTATACATGGATGGCAATGCTTGAGAATGACGATCTAAAGAAGGTAAAGGAATCAGGTGGAACGAAAGTTTCAAAAAAGAGGCAAAAAGGGGGAAATGTCCAAGACCAGAGAATGATTTTGCTCCCAAACTTAGGTATAGGCTTTGGCAACTTGACTGCAACTGCTGAGAACACTGTACCTGGATCTGGAGAAACAAAATTGCCTGATGGTGCTGAAATGTTTGTTAAGGCGGCCTCAAATTGTTGCAGCTCTATCTGCAATTACTGCTGTTGCATGTGCTGCCTCCAGGCCTGTATCCGGATAAACAACCAATGTGCAACTGTCTTTACTCAGCTTTGCGTTGGTTTAGGATGTTTCAGCTGCATCCGCTGTTGTTCAGACACATGCTGTTCTGGAAATGAACACTGA 2250 0.4342 MEEEFSNAVEEGLRLSKRVYFGNDRAVSPPKPPMAMIKSHTAWLPTAPMLYARIHDPAIVDNPDVPSYQPHVHGRCDPPALIPLHMTAVNLRADCYLDHTAFLTLTASWRLHCVSGSRAADCLLALPMAAQGSILGVEVSVHRKSFSTQLVDMEDNNGKENVTRTQDGGFLKPDAFTLTIPQIDGGSNLSVKISWSQKIQCSNDVFSLNVPFVFPDYVNPVGKRISKTEKIQINVNTVTGSEVLCNTTSHPLKEVRRNAGDIGFSYESNVLSWSKNDFSFSYAVSSSQINGAVFLESASVDDFDQREMFCMYLSPGNLRSRKVFRRDIVFVIDISGSMRGKLIEDTKNALSAALSKLDPEDSFSIIAFNGERYLFSTSMELASKDAVERAIEWININFVAGGDTNILQPLNKAMEMLSDARSSAPIIFLVTDGSVENERQICDMVKNHMINGKSTAPRIYTLGIGSFCNHYFLRMLAMISRGQHIAALDPQMLKLFDKASSLVLANITMDIFNDVDEVEVCPSPIPDLSSDGPLVIFGRYKGSFPEVIEVKGVLADFSSFITDMKIQKAKDIPIQRVSARDQIEYLTAQAWLSNDKQLEQKVAKLSLQTGFTSEYTWMAMLENDDLKKVKESGGTKVSKKRQKGGNVQDQRMILLPNLGIGFGNLTATAENTVPGSGETKLPDGAEMFVKAASNCCSSICNYCCCMCCLQACIRINNQCATVFTQLCVGLGCFSCIRCCSDTCCSGNEH* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1990 749 Pfam von Willebrand factor type A domain 327 483 IPR002035 -
Lja6g1990 749 SUPERFAMILY vWA-like 325 488 IPR036465 -
Lja6g1990 749 ProSiteProfiles VWFA domain profile. 327 515 IPR002035 -
Lja6g1990 749 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 748 - -
Lja6g1990 749 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 748 - -
Lja6g1990 749 CDD vWA_interalpha_trypsin_inhibitor 324 484 - -
Lja6g1990 749 Gene3D von Willebrand factor, type A domain 326 500 IPR036465 -
Lja6g1990 749 SMART VWA_4 325 500 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1990 Lja-Chr6 47876326 47884551 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1990 - - gmx:100820133 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1990 6 47876326 47884551 Lja6g1990 6 47876326 47884551 ECH
Lja4g1503 4 13886864 13892374 Lja6g1990 6 47876326 47884551 PCT