Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1503 ATGGCGGAGGAATTTTCGAGAGCGGTGGACGACGGGCTGAAATTATCAAAGCGAATTTACTTCGGGAAGGACAGGGCGGTGGCGCCGCCCAAGCTGCCGGCACCGATGGCTAGGTCACCGGACGCGCTTCTTCCCACCGCGCCGATGGTTTATGCCGTGATTTACGATCCAGGGATCGTGGATAACCCTGACATCCCGAGCTACCAGCCTCATGTGTATGGACGGTGCGACCCTCCGGCGCTGATTCCCCTTCAGATGAACGGTGTTGAGATGGAAATTGATTGCTATTTGGATACTGCGTTTGTCACCGTTTCTGGTTCGTGGAGGCTCCATTGCGTCATGGGTAGCCGCGCGTGTGATTGCCGTATTGCTATTCCCATGGGGCACCAGGGTTCAATTCTAGGTGTGGAAGTTACTGCTCATAGAAAAACATACTCTACTCAGCTTGTTGTAATGGAAGACAACAGTGTGAATGAAAATGCCACCATTGCTCAACAAGGAGGCTTTCTCAAATCAAATATATTTACTTTGACTGTACCTCAGATTGATGGGGGTACCAATTTATCGATTAAAATTCAATGGTCTCAGAAAATAGTGAATTGCAATGGGGAGTTGACTTTGAACGTGCCTTTTACCTTCCCTGAATTTGTCACCCCAGCTGGGAAGAAAATGTCTAAAAAGGAAAAGATACAAATCAATGTGGAGGCTGTTGCTGGAAGTGAGCTTCTGTGCAGGACAATGAGCCACCCCCTAAAGGAAATGAGGCGTGATGCTGGGAGTATTGGTTTCTTATATGATTCCCAAGTTCTCTCGTGGTCAAATACTGATTTTAGCTTTTCATATGCTGTTTCCTCCAGTCGTATAGATGGTGGTGTTCTTTTGCAATCTGCATCTGTGCATGATTTTGATCAAAGAGAGATGTTCTACATGTACCTTTCTCCCGGAGATATTCACCGTAAGAAGGTATTCAGAAAGGACATAATATTCGTTATTGACATCAGTGGAAGCATGCAGGGAAAGCTAATTGATGACACAAAGAATGCACTATCGTCTGCCCTCTCTAAGCTTAATCCTGATGATTCATTTAATATTATAGCCTTTAATGGAGAGAGTTATCTATTTTCAAAATCGATGGAACCGGCTTCTAGTGATGCTGTTGAAAAGGCCACTGAGTGGATGGATGTGAACTTTGTCATTGGGGGTGGTACAAATATTTTGCGTCCCTTAAACACGGCAATAGAGATGCTATCCGGTGCTCAAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGGCAAATTTGTGATTTGGTAAAGAATCATATGACCAATGGAGAGTCAATATGCCCCCGAGTTTACACTTTTGGCATAGGCTCATTCTGCAATCACTATTTCTTGCGAATGCTTGCTGCAATTGGTAGGGGCCAATATGACGCTGCAGTGGATGTCGATTTGGTTGAGCCTCGAATGCTGACGTTGTTTGAAAAGGCATCATCTCTCATTCTCGCAAATATCAAAATGGATGTATTGGATGATATTGATCAACTTGAGGTATATCCTTCCCACATTCCAGATCTTTCAACAGAGGGTCCATTGATTTTATCTGGCAGATATAAGGGAAATTTCCCCGAAACTGTTAAAGTCAAAGGTATCATGGCTGATTTCAGTGATTTTGTAATAGATATGAAGATTCAAACAGCTAAGGACATACCTGTACAAAGGGTTTGTGCAAGAGATCAAATAGAGCATCTTACTGCTCAAGCATGGCTATCCGAAAACAAACAATTAGAACAGCAGGTTGCCAAACTAAGCCTGCAGACTGGCTTTATGTCTGAGTATACACGTATGGTAGTACTTGAAAATGATCATCTAAAGAAAGCCAAAGAATCAGCTGGTGGGAAAGAAGTGTCAAAAAAGAGTCATGCTCCACACGAGGCAAACACAAACGTACAGGGCCAGAGAATGATTTTACTCCCACACATAGGTGTCGGCTTTGGCAACTTGACTGCAACTGCTGAAAACACTCCTCCAGGAGCTGAAAAGATGCTTGAAATGCCCGAAATCTTTAAGGCGGCCTCAAATTGTTGTAGCACCTTGTGCAGTTACTGCTGTTGCATGTGCTGCATCCAGTGCTTTACCCGAATGAACAACCAATGTCTCACTGCATTGACTCAGCTTTGTGTTGGTATAGGATGCTTCGGCTGCCTCACATGTTGTTCAGACATATGCTGTGGTGGAAACGATAGTTGA 2268 0.4392 MAEEFSRAVDDGLKLSKRIYFGKDRAVAPPKLPAPMARSPDALLPTAPMVYAVIYDPGIVDNPDIPSYQPHVYGRCDPPALIPLQMNGVEMEIDCYLDTAFVTVSGSWRLHCVMGSRACDCRIAIPMGHQGSILGVEVTAHRKTYSTQLVVMEDNSVNENATIAQQGGFLKSNIFTLTVPQIDGGTNLSIKIQWSQKIVNCNGELTLNVPFTFPEFVTPAGKKMSKKEKIQINVEAVAGSELLCRTMSHPLKEMRRDAGSIGFLYDSQVLSWSNTDFSFSYAVSSSRIDGGVLLQSASVHDFDQREMFYMYLSPGDIHRKKVFRKDIIFVIDISGSMQGKLIDDTKNALSSALSKLNPDDSFNIIAFNGESYLFSKSMEPASSDAVEKATEWMDVNFVIGGGTNILRPLNTAIEMLSGAQSSVPIIFLVTDGTVEDERQICDLVKNHMTNGESICPRVYTFGIGSFCNHYFLRMLAAIGRGQYDAAVDVDLVEPRMLTLFEKASSLILANIKMDVLDDIDQLEVYPSHIPDLSTEGPLILSGRYKGNFPETVKVKGIMADFSDFVIDMKIQTAKDIPVQRVCARDQIEHLTAQAWLSENKQLEQQVAKLSLQTGFMSEYTRMVVLENDHLKKAKESAGGKEVSKKSHAPHEANTNVQGQRMILLPHIGVGFGNLTATAENTPPGAEKMLEMPEIFKAASNCCSTLCSYCCCMCCIQCFTRMNNQCLTALTQLCVGIGCFGCLTCCSDICCGGNDS* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1503 755 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 754 - -
Lja4g1503 755 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 754 - -
Lja4g1503 755 Coils Coil 592 612 - -
Lja4g1503 755 CDD vWA_interalpha_trypsin_inhibitor 323 497 - -
Lja4g1503 755 ProSiteProfiles VWFA domain profile. 326 519 IPR002035 -
Lja4g1503 755 Pfam von Willebrand factor type A domain 325 483 IPR002035 -
Lja4g1503 755 SMART VWA_4 324 504 IPR002035 -
Lja4g1503 755 Gene3D von Willebrand factor, type A domain 325 502 IPR036465 -
Lja4g1503 755 SUPERFAMILY vWA-like 325 483 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1503 Lja-Chr4 13886864 13892374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1503 - - gmx:100777542 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1503 4 13886864 13892374 Lja4g1503 4 13886864 13892374 ECH
Lja4g1503 4 13886864 13892374 Lja6g1990 6 47876326 47884551 PCT