Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1979 ATGTTGGGCAAGAGATCCCAGCTACTAATCCGAAAAGTTTCAGAATTATTAGTTTTCGGTGACGGCGGTGCCGCCGCGCTTCTGGACACCATGGAAAGCCCAAGAAGCCCGTTTGAGCTGAACTCACCTAGAGGTATGAAAAAAAGCTACGATTCTGGCGGTGTTGGACTGGGAATTGTGGCGGCTCTTGACAAATCCCAGCAGCACCATGAGGTTCTTCTGCCCAAACCTGCTGTTTGTTCTGGACCAATCCCAGTTCAAACCGTGAAACGTGATAATCAGTTTCCAAAGATTGTTGTTGGAAGCCCAGAGGATTACACCTATGTGACTTACCATGAACCCAACAAAACCGCCACAAAGGTGGTTTACTATGATGGTGGTGAAGGTAGAATTTTCAGACATGGTTATGAATATGATATTAAAAACAAGAACAAGGTTGGTGTTTTCAGAAAAACCCCACCAACGCAAACTTCAGTGAAAGCTGAATCATTATTTCCCACCTCGGATTTTCTAAGTTCATGTCATCTATGCAGAAAGAAACTACATGGAAAAGACATATACATGTACAGAGGAGAGAAAGCATTTTGCAGTACAGAGTGTCGTTCAAGTCAGATAACGATGGACGAGCGCAAAGAGCGGTGTAGATCAAAAGCTTCAAGGTCTGTGGAGTTGTCAAGCTCTCAAAATTCAAGGGATCAAATGTTTTCAACTGGGATTGTGGCCCTTTAG 729 0.439 MLGKRSQLLIRKVSELLVFGDGGAAALLDTMESPRSPFELNSPRGMKKSYDSGGVGLGIVAALDKSQQHHEVLLPKPAVCSGPIPVQTVKRDNQFPKIVVGSPEDYTYVTYHEPNKTATKVVYYDGGEGRIFRHGYEYDIKNKNKVGVFRKTPPTQTSVKAESLFPTSDFLSSCHLCRKKLHGKDIYMYRGEKAFCSTECRSSQITMDERKERCRSKASRSVELSSSQNSRDQMFSTGIVAL* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1979 242 PANTHER OS02G0174800 PROTEIN 1 242 IPR044604 -
Lja6g1979 242 Pfam zinc-finger of the FCS-type, C2-C2 164 211 IPR007650 -
Lja6g1979 242 ProSiteProfiles Zinc finger FLZ-type profile. 169 212 IPR007650 -
Lja6g1979 242 PANTHER DUF581 FAMILY PROTEIN 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1979 Lja-Chr6 47744771 47746085 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1979 - - gmx:100816402 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1979 6 47744771 47746085 Lja6g1979 6 47744771 47746085 ECH
Lja4g1495 4 13839884 13841314 Lja6g1979 6 47744771 47746085 PCT