Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1495 ATGTTGAGTAAGAGACCACCACCCATCATCGGAAAGTTATCGGAGCTACTAGTCTCCGGCGGCCGCGCGGTGGCGCTGTTAGAAAGCCCAAGAACCCCGTTAGACACCAAGATGGTGCCACCATCACCAAGAGGGTTGAAAAGCTACGACCTCGGTGGTGTTGGCCTCAAAATCGTGGTGGATCTTGATAAATCCTGTGAAGTGAGACGCGAGGTTTTGCCCAAACATGCCGTTTGCAGCTCCAATATGAACCGATCGGGTCCGATTCCGGTGAAGAAAAACTCAGATGCTAGATACGAAATCGATGATCAGGGAAGCTTGGAAGAAGAGTTTACCTATGTCACATGCCATGTACCTAACAAAACGTTCACCAAGGTTTACTATGATGGTGGTGAAGGTGATTTTGGGAAGAAGAACGGTAAAGTTGGTGTTCTTAGAAGAACCCCACCTCAAAATTTTGAGCCTGAACCATTGTTTCCCACCTCGAATTTTCTCAGTTCATGTAATCTATGTGGGAAGAAGCTTCATGGCAAGGATATATACATGTACAGAGGAGAGAAAGGATTTTGCAGCCAAGAGTGTCGATCAAGTCAGATAATGATGGATGAACGCAAAGAGGTGTGTAGATCAGAAGCATCCGTGGAATTGTCAAGTTCACCTTATACAACAAGGGAACAGATATTTTCAACTGGGATTCTGGCACTTTAG 708 0.4576 MLSKRPPPIIGKLSELLVSGGRAVALLESPRTPLDTKMVPPSPRGLKSYDLGGVGLKIVVDLDKSCEVRREVLPKHAVCSSNMNRSGPIPVKKNSDARYEIDDQGSLEEEFTYVTCHVPNKTFTKVYYDGGEGDFGKKNGKVGVLRRTPPQNFEPEPLFPTSNFLSSCNLCGKKLHGKDIYMYRGEKGFCSQECRSSQIMMDERKEVCRSEASVELSSSPYTTREQIFSTGILAL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1495 235 ProSiteProfiles Zinc finger FLZ-type profile. 163 206 IPR007650 -
Lja4g1495 235 PANTHER FCS-LIKE ZINC FINGER 12 1 234 - -
Lja4g1495 235 Pfam zinc-finger of the FCS-type, C2-C2 159 205 IPR007650 -
Lja4g1495 235 PANTHER OS02G0174800 PROTEIN 1 234 IPR044604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1495 Lja-Chr4 13839884 13841314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1495 - - gmx:100816402 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1495 4 13839884 13841314 Lja4g1495 4 13839884 13841314 ECH
Lja4g1495 4 13839884 13841314 Lja6g1979 6 47744771 47746085 PCT