Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1852 ATGCCATGCTTCACACCACACCCTTCTCTCCTCTTCCTCCTCTTTCTCTCTCTCTTCTCTCTCTCCTCCTCCACCAAAACCTTCCATTTTCATTCCTTACGTATTCCAGATGGTGTTGAGGTCGTTGGTGAGAGAGGGTACGGCGAGGTGCGGCCATGGGGAACAAGGAGATCCATGGCGGAAGACGCTGCGGCCAACACCACAACTTCTCTGATATTGGCTCAGCATAGGACAACCAGGAAGGACCCTCTTGACCATTTCAACCGCTACACCGGTGGTTGGAATATCAGCAATCGCCATTACATTGCTTCGGTTGTTTTTACTGCGGTTCCCTTCTTTGTTGTTGCTGCTGTGTGGTTTGTGGTTTTTGGGATTTGTTTATCCTTCATCTGCCTCTGTTACTGCTGTTGCCGTAGGGAGCCGTATGGTTATTCTCGTTTGGCCTATGCTCTATCCTTGATCTTCCTCATTTTCTTCACCCTTGCAGCAATAGTTGGATGCATAGTCCTTTACACTGCTCAGGGGAAGTTTCATGGAAGCACCTCAAACACACTGAAGTACGTGGTCAGCCAGGCTGACTTCACTGCTGAAAACCTCAGGAACGTGTCAGATTATCTTGATGCAGCCAAGAGGATTGGAGTCGATGCTGTTTTTTTGCCCGGTGATGTTCAGAAGAATATCGATGATGTGAAAACAAAGATTAATTCTTCTGCTGTGGAACTCTCCAGCAAAACGGGAGATAATTCGCGTAAAATACAAGACGGCTTAGATGGAATGAGATTGGCTCTGATTATTCTTGCTGCTGTTATGCTCTTTGTTGCTTTTCTAGGATTCTTATTTTCGATATTTGGGTTGCAAGGTCTAGTATACTTTTTGGTGATTGTTGGATGGATTCTTGTAGCAGGCACATTTATACTTTGTGGTGTATTTCTTTTTCTTCACAATGTTGTTGCAGATTCATGTGTTGCCATGGATGAGTGGGTTCTGAACCCTACTGCACATACGGCCTTGGATGAAATTCTTCCGTGTGTGGATAATGCAACTGCGCAGCAAACCTTGTTACAAAGCAGGGACGTGACACACGAGCTTGTGAACTTAGTTGATAAAATCATTAACACCGTCACAAACAGGAACTTACCACCTGCTGCGGGGTCTTTGTATTACAATCAATCTGGCCCCCTCATGCCGGTTCTGTGCAATCCATATAACCCTAACCTCACAACTCGGTCATGTGCTCCTGGAGAAGTTCCCGTGGACAATGCTAGAGAGGTGTGGAAGAATTATACATGTCAGGTTTCCCCAGCAGGCATTTGCGCAACGCCTGGTCGGATGACACCTACCATTTATGGCCAATTCGAAGCTGCTGTAAATATAAGCTATGGCTTGTATCACTATGTTCCATTCTTGGTTGATCTACAAGACTGCACTTTTGTTCGGGAAACATTCACAGACATCAGCAACCAATATTGTCCTGGTCTGCGGAGAGATAGTAAATTGATTTATGTTGGTTTAGTTATGGTATCTGTTGGTGTGATGCTGTCTCTGATCCTTTGGGTCATATATGCAAGAGAGCGGCGGCATCGTGTTTACACTAAGCAGTTCACCGGATAG 1611 0.455 MPCFTPHPSLLFLLFLSLFSLSSSTKTFHFHSLRIPDGVEVVGERGYGEVRPWGTRRSMAEDAAANTTTSLILAQHRTTRKDPLDHFNRYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVVFGICLSFICLCYCCCRREPYGYSRLAYALSLIFLIFFTLAAIVGCIVLYTAQGKFHGSTSNTLKYVVSQADFTAENLRNVSDYLDAAKRIGVDAVFLPGDVQKNIDDVKTKINSSAVELSSKTGDNSRKIQDGLDGMRLALIILAAVMLFVAFLGFLFSIFGLQGLVYFLVIVGWILVAGTFILCGVFLFLHNVVADSCVAMDEWVLNPTAHTALDEILPCVDNATAQQTLLQSRDVTHELVNLVDKIINTVTNRNLPPAAGSLYYNQSGPLMPVLCNPYNPNLTTRSCAPGEVPVDNAREVWKNYTCQVSPAGICATPGRMTPTIYGQFEAAVNISYGLYHYVPFLVDLQDCTFVRETFTDISNQYCPGLRRDSKLIYVGLVMVSVGVMLSLILWVIYARERRHRVYTKQFTG* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1852 536 PANTHER TRANSMEMBRANE PROTEIN 14 533 - -
Lja6g1852 536 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 14 533 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1852 Lja-Chr6 45847279 45852492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1852 - - gmx:100809927 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1852 6 45847279 45852492 Lja6g1852 6 45847279 45852492 ECH
Lja4g1846 4 18070396 18073626 Lja6g1852 6 45847279 45852492 PCT