Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1846 ATGTCACGCGTCACATCAAACCCTTCGTTTTTCCTTCTCTTCTTCTCCTTCTTCCTCCTCATTCCTCTTCTCTCCACCGCATTACAAGACGGCGTTGAAATCGCTGCTGTTAAACAGCATGATCAGGTGCTGCCGTGGCTCCGATCAGCGGCGGAAGACGCTGCTTCTCCGGCGGTGAATTCCACCACTCTGGTCCTCGCTCAGGAACGAACTCGCCGCAAGGATTTCTTTCACCATTTTCGTCGTTACAATGGTGGCTGGAATATCACCAATAACAATTACATTACGTCAGTTCTTTCTACTGCGATTCCCTTCTTGGCTGTTGCTGTGGCCTGGTTCGTGATTTTCGGGGTTATTCTAAGTGTTATCTGTGCCTGTTACTTCTGTTGCCCTGGAGAGCCTAATGGATATTCTAAATTGGGCTATGCTTCATCCTTGATCATCCTCATCCTTTGCACCGTTGCAGCAATAGCTGGATGCATTGTCTTGTACATTAGTCAGGGGAAGTTTGATGGAACGACTTCAAACACACTGGATTACGTTGTGAGTCAGGCGGAATTCACCGCTGAAAACCTCAGGAATGTGTCGAGATATTTTGATTCGGCTGAGCAGATTGTGATTGGAGTTGGTTTGTCACCAGCTGTTGAAAATGACATTGATAATGTTAAAAAGAAAATCAGCACTGCTACTGATTATCTTTCCAAGAAGACGCGAGATAATTCAAAGATGTTACACCGAGCCATAGATGCAATGAGATTCGCTCTTATTGTTGTTGCTGCTGTTATGCTCTTCGTTGCATTGCTTGGGTTCTTATTTTCAATACTTGGGTTGCGGTGTCCTGTATACTTCTTGGTAATTGTTGGATGGGTTCTGGTTGCTGGCACATTTTTACTTTGTGGTACATTTCTTTTTCTACATAATGCCATTGCAGATACATGTGTTGCCATGGATGAATGGGTTCTGAACCCCACTGCTCACACAGCCTTGGATGAAATTCTTCCATGCGTGGACAATGCAACTGCTATGGAGACCTTGGCACAAAGCAAGAACGTGACACATTCCCTTGTTGAATTAGTTGACAACTTCATTTCTAGTGTCACAAATGGAAACACCTTTCCTTACAATCAATCAGGCCCCCTCGTGCCTGCTCTCTGCAATCCATTTAATAGCGACTATACACTTCGGCAGTGTGCAGCAGGGGAACTTGCATTGGAAAATGCTACTGAGGTTTGGAAGAATTATACCTGTGATGCATCTTCATCTGGAAATTGCGTGACACAAGGTCGAATCACCCCTTCCATGTACTCTCAAATGGCAGCTGCAGTGAATGTGACATATGGCTTATATCACTATGGCCCATTTTTGGTTGATTTAGAAGACTGCACTTTTGTTAGGAGAACATTCACAGAGATTAGCAACAACTATTGTCCTGGTCTGCAGAGTTATACTAAATGGATCTATTGGGGATCAGTTGCAGTGTCTGTAGCTGTAATGTTGTCCTTGGTATTTTGGATCATCCATGAAAGGGAGCGGCGGCATCAGATTCACACCAAACAGGTCATGGCCAGATAA 1572 0.4447 MSRVTSNPSFFLLFFSFFLLIPLLSTALQDGVEIAAVKQHDQVLPWLRSAAEDAASPAVNSTTLVLAQERTRRKDFFHHFRRYNGGWNITNNNYITSVLSTAIPFLAVAVAWFVIFGVILSVICACYFCCPGEPNGYSKLGYASSLIILILCTVAAIAGCIVLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQIVIGVGLSPAVENDIDNVKKKISTATDYLSKKTRDNSKMLHRAIDAMRFALIVVAAVMLFVALLGFLFSILGLRCPVYFLVIVGWVLVAGTFLLCGTFLFLHNAIADTCVAMDEWVLNPTAHTALDEILPCVDNATAMETLAQSKNVTHSLVELVDNFISSVTNGNTFPYNQSGPLVPALCNPFNSDYTLRQCAAGELALENATEVWKNYTCDASSSGNCVTQGRITPSMYSQMAAAVNVTYGLYHYGPFLVDLEDCTFVRRTFTEISNNYCPGLQSYTKWIYWGSVAVSVAVMLSLVFWIIHERERRHQIHTKQVMAR* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1846 523 PANTHER TRANSMEMBRANE PROTEIN 38 520 - -
Lja4g1846 523 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 38 520 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1846 Lja-Chr4 18070396 18073626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1846 - - gmx:100809927 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1846 4 18070396 18073626 Lja4g1846 4 18070396 18073626 ECH
Lja4g1846 4 18070396 18073626 Lja6g1852 6 45847279 45852492 PCT