Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1844 ATGGTACCCTCAAACGCACCCAAAACGTACTACTCATCCATCCACAACTCAATCACCTCTCTGTGCAAGACCATTCTTCCCGTGGGCTTCAACAAACGGCACCGTTTGGTATCCGCAGAGCACAAGCTGCAGTCCGATAACCTCAAATGGCAGCAAGACACTCTCCACCAGCTGCTGAACTTGATGGCTCTTCACCGTGATGATATCCTTCCTGAAGCTGAGGTTTCTGCTTTTAAAGCTCATTTGCTTGAAACCCTTCTTGCTTGTCCTCATCCACAGCGAGATTATCCCCTTATACTCAGAGATAAGATAGGGTTCTTACAGGAACTGCTTGATGCCAAATGCATTTCTGAAGGAGAGTACCATTCTTCAAGAAGGCCTTTGCTACAGAGGCTGGCGGCTCAAGGAGGTGAAATTGGAGGCAGAGATGTTATGGTGGTTGCTGAGGCACAGGACAGGGAACAAAATTCAGAGGAAGAGTGGTCAGTGATTGACTTGAAGGATGATCAATGCTTGATGAACAAGGAGAACTCAAATTCTAATAAGAAGAAAACCAGGAAGAACTTCAAAGGAGCATTTAGCTTTGGTTCTTCTAACAAACATGGAAAACATTCGAAGGAGAAGAGCATATTCGATTCACCCTCTTTACAAATGCACTCAGCTCATTCAAAGATTCCTTCTTCAACTATCTATGCCAACAATGAAACAAGGCATGCCAAGGACAGCCCCTTGTGGGATGGTCCAGAAAATTTTAAGAGGAAACCATTCGGAATTCTGTTTCATAGGGAGAAGAAAGAAGGGCATAGTGGTGGAGATCAGGTTCTTGAACCAGAGGGAAGAACGACAAAAAAACAATGGGGGTTCAAAGGGTTCGAGAAATTGAGGAAAAATGACTTAGATGATGAGACAGCACCTTTGTCTCTCTTAATGGAGAACAAGTTGCATTTGCATTCTGATGTATCACCGTCCGAATTTTCCATAAGTGATAAGGTTTCTGAGGACAAGATAAACAAGGAGGTGTCAATAATCCAGACAGAACTTAGGAGCACAAACACAAATGCAAAGTTTTCGAATGACCAGATACAAGCAATTTCTACCGAACATCCAGAGAACAAGCCCGAGTTGAAAAAACACTTTCCCAAATCGCCCTGTGACCGATATGGCAGTGTTGTGTTGGATGCGGTGAAGGAAAATGTTGGAGAGAAGGAAAATATGCGCAACCATGCTGAAGAAAAATATGAAAGCACAATGGGGTGGACAACATTTGAAGATGACGAAAACCTGCACCCAAATCTTTTTGCTCATCAAGATAATTCATTGCGCAGCAGTAGCATCAATCCATTTTCTCAGTGGAACTGA 1359 0.4334 MVPSNAPKTYYSSIHNSITSLCKTILPVGFNKRHRLVSAEHKLQSDNLKWQQDTLHQLLNLMALHRDDILPEAEVSAFKAHLLETLLACPHPQRDYPLILRDKIGFLQELLDAKCISEGEYHSSRRPLLQRLAAQGGEIGGRDVMVVAEAQDREQNSEEEWSVIDLKDDQCLMNKENSNSNKKKTRKNFKGAFSFGSSNKHGKHSKEKSIFDSPSLQMHSAHSKIPSSTIYANNETRHAKDSPLWDGPENFKRKPFGILFHREKKEGHSGGDQVLEPEGRTTKKQWGFKGFEKLRKNDLDDETAPLSLLMENKLHLHSDVSPSEFSISDKVSEDKINKEVSIIQTELRSTNTNAKFSNDQIQAISTEHPENKPELKKHFPKSPCDRYGSVVLDAVKENVGEKENMRNHAEEKYESTMGWTTFEDDENLHPNLFAHQDNSLRSSSINPFSQWN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1844 452 Coils Coil 392 412 - -
Lja6g1844 452 PANTHER OS09G0556800 PROTEIN 313 440 - -
Lja6g1844 452 PANTHER OS09G0556800 PROTEIN 1 308 - -
Lja6g1844 452 MobiDBLite consensus disorder prediction 213 232 - -
Lja6g1844 452 MobiDBLite consensus disorder prediction 174 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1844 Lja-Chr6 45781727 45784400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1844 - - lja:Lj6g3v1089080.1 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1844 6 45781727 45784400 Lja6g1844 6 45781727 45784400 ECH
Lja4g1640 4 15418926 15427970 Lja6g1844 6 45781727 45784400 PCT
Lja4g1837 4 17965419 17967553 Lja6g1844 6 45781727 45784400 PCT