Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1029 ATGGCGTCCAAGTTCGGCTTAGCTGGTGGAATTCCAGAGCGCAAGGTTCGTCCCATATGGGACGCCATTGATTCTCGCCAGTTCAAGAGCGCTCTCAAGCATGTCACCACTCTCCTCACCAAGCACCCTAATTCCCCTTACGTTCTCGCTCTCAAAGCTCTCGTTTTGGAACGAATGGGGAAGCCCGACGAAGCGCTTTCGGTTACCCTCAATGCTAAGGAGCTTTTGTATGCCAAAGAATCTCTCTTGATGGATGATCTCACTCTCAGCACACTGCAGATTGTTTTCCAGCGACTGGATCACTTGGATTTTGCTACTGAGTGTTATGAACATGCCTGTGCTAAATTCCCCAATGACAAGGGATTAATGATGGGGTTGTTTAACTGCTATGTTCGCGAGTACTCATTTGTGAAGCAACAACAGACAGCTATTAAAATGTACAAGCTCTTTGAAGAAGAAAGGTTTCTTCTTTGGGCAGTTTGTAGCATCCAACTTCAGGTACTTTGCAGCAATGGAGGAGATAAGCTATTAGTTTTAGCTGAAGGCTTACTTAAGAAACATGTTGTTTCACATAGCTTAGATGAGCCTGAAGCTCTTATGGTCTATATTTCCATATTGGAACGTCAAACTAAGTTTGGGGATGCTTTGGAAATTCTTTCTGGGAAATTGGGATCGCTATTGATGATTGATGTTGACAAGCTACGGATGCAGGGGAGACTTCTGGCTCAGGCAGGTGACTACACCGCTGCTGCTGATATCTTTCACAAAATCCTAGAGTCATGTCCAGATGACTGGGAAGGTTTCCTGCATTACTTAGCCTGTTTGCTGGAAGATGGTAGCATTTGGTCTGATGAGGCTGTTAATGATCCAGTTCACCCCCCAAAATTTGTCAATTGCAAAGTTTCACACTTGACAGATGAACAGTTTGACAGTCAAATATCAACAGCATCAGTTTTTATACAGAAGTTACAAGCTGATACTGTGAATAATTTGATAAGGTGTCCATACCTGGCATCTATAGAAATTGAAAGAAGAAAACATTTACGTGGGAAGGAGAATGATGAGAACTTAATGGATAGCATTGTGCAGTACTTTTGCAGGTTTGGTCACTTGGCCTGCTTCACTTCTGATGTTGAGATGTTTGTTGAAGTCCTGTCTACCGATAGGAAGGCAGAGCTCTTGGAGAAGTTAATGAAAAACAGCAGTGCTTTATCAGCTCCACCAAAGAAGACACTCGAGCTTTCTATAAGCCTTTTCAAAACTAAACAATTATTGCTAGGGGACATGTTCAAGTGTTCTGAAAGTGATCTTGGGGTCTTTTGTGTTCAAATGTTTGAAATGTATTGCAAGAACCTTCCGCTTTCAAAAGATTTGGATCCTCAAGAGAGTATGCATGGTGAGGAGCTGCTTTCAATGATATGTAATCTTTTGGTCCAGTTATTCTGGCGTACTAAGAGTGCTGGCTACTTGATAGAGGCAATTGTGGTTTTGGAGTTCGGCTTAGCCATACGAAGATATGTATCACAGTACAAGATCTTGCTGTTGCACTTGTATTGTCACTATGGCGCTCTTTCAGTAGCACATGAATGGTATAAATCACTGGATGTGAAGAATATTTTGATGGAAAGTATGTTGCACCATATTTTGCCTCAGATGTTGGTATCTCCACTTTGGACTGATTTAAACTGTCTGCTAAAGGATTACCTGAAGTTTATGGATGACCATTTCAGAGAATCTGCAGATTTAACATTTCTTGCATATCACCATAAAAAGTACTCAAAAGTAATTGAATTTGTCCAGTTTAAGGATAGGTTGCAACACTCTAGTCAGTATTTAGCGGCTAGAGTTGAAACACCCATTTTACAGCTAAAGCAGAATGCAGATAACATCGAAGAAGAAGAGGGCATACTTCAAAGCTTGAAATGTGGTGTTCACTTCCTTGAGCTATCTAATGAGATTGGGTTGAAGTCTTTGACCTTCAATGAAGACTTGCAGACACGGCCCTGGTGGACACCAACTTTGGATAAAAATTACCTCTTAGGGCCATTTGAAGGGATTTCTTATTGTCCTCCTAGAGAAATACCGACCAAAGAGAGGGAGGTGAGTTTAAAGAGGGTCATTCAGAAGAAATCCCTACTTCCTCGGATGATCTATCTTTCAATTCAAAATGCCTCAGCATCAATCAAAGAGCATGTTGAGGTCAATGGTTCTGTTACACCAGACATCACTTTGGAGCTGAAATTATTGCTTGAGCTCTATGCACAATATTTGGGCTTTTCTTTTAATGAAGCAATAGAAGTGGTCATGGATTTCTCTAATGGTCAACGTTCTTCCGTGGTCTCTGACTCCAACTTAATTGACTGGTTGAATTTCATGGTATTCTTAAATGCGTGGAGCCTAGGTTCCCACGAACTTGGGCACCCTGATAGCAATGGATGTAGGCCTCGTATTTGGAATACCTTAGACTCTTTGCTGGAGAAGTATATTTTGGAGAAGGTTAGGTCCATAGAGCCCCATCTCAGTTCTCCTTGTAGTGACATTCAACTTTTGATGCAATTAGTTACGGAACCTTTGGCCTGGCATGGACTTGTGATACAATCTTGCTTGAGATCATGTCTTCCATCGAGTAAAAAGAAAAAGAAAAGTGGATCCGCTCATCAGTCTAGCTCAAATCTGGTGCATGCAATCACAGATTCTGTCCAGAATTTATCTCTTGTCTTGGAGGATGTTATGAAATGGATAAGTGAATGGAACAGAAGGCCTGAAGATCAGAATTTGGAGGACATTCTCTTGCTTCTTCGGAAAGGTGGTCAAAGTGATGGGCCAGGGAAGGTCTTTCACATTTTAGAAACTTTCATTTCCTCTATGAATGATGAGGAACTCGGTGATCGCATCTCCCAATCACTCAAGTCTTGGAGTCCTGCTGATGTTGCCAGGAAAATGATCACCGGGAAGCTTAAAGTGTTGACAGAATTTTCTGCCATCTGCGAGTCAAAATTGAAGTTATTACAATCTGTGAAACAGCAGCTTGCTCAACTTTGA 3042 0.4162 MASKFGLAGGIPERKVRPIWDAIDSRQFKSALKHVTTLLTKHPNSPYVLALKALVLERMGKPDEALSVTLNAKELLYAKESLLMDDLTLSTLQIVFQRLDHLDFATECYEHACAKFPNDKGLMMGLFNCYVREYSFVKQQQTAIKMYKLFEEERFLLWAVCSIQLQVLCSNGGDKLLVLAEGLLKKHVVSHSLDEPEALMVYISILERQTKFGDALEILSGKLGSLLMIDVDKLRMQGRLLAQAGDYTAAADIFHKILESCPDDWEGFLHYLACLLEDGSIWSDEAVNDPVHPPKFVNCKVSHLTDEQFDSQISTASVFIQKLQADTVNNLIRCPYLASIEIERRKHLRGKENDENLMDSIVQYFCRFGHLACFTSDVEMFVEVLSTDRKAELLEKLMKNSSALSAPPKKTLELSISLFKTKQLLLGDMFKCSESDLGVFCVQMFEMYCKNLPLSKDLDPQESMHGEELLSMICNLLVQLFWRTKSAGYLIEAIVVLEFGLAIRRYVSQYKILLLHLYCHYGALSVAHEWYKSLDVKNILMESMLHHILPQMLVSPLWTDLNCLLKDYLKFMDDHFRESADLTFLAYHHKKYSKVIEFVQFKDRLQHSSQYLAARVETPILQLKQNADNIEEEEGILQSLKCGVHFLELSNEIGLKSLTFNEDLQTRPWWTPTLDKNYLLGPFEGISYCPPREIPTKEREVSLKRVIQKKSLLPRMIYLSIQNASASIKEHVEVNGSVTPDITLELKLLLELYAQYLGFSFNEAIEVVMDFSNGQRSSVVSDSNLIDWLNFMVFLNAWSLGSHELGHPDSNGCRPRIWNTLDSLLEKYILEKVRSIEPHLSSPCSDIQLLMQLVTEPLAWHGLVIQSCLRSCLPSSKKKKKSGSAHQSSSNLVHAITDSVQNLSLVLEDVMKWISEWNRRPEDQNLEDILLLLRKGGQSDGPGKVFHILETFISSMNDEELGDRISQSLKSWSPADVARKMITGKLKVLTEFSAICESKLKLLQSVKQQLAQL* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1029 1013 Pfam N-acetyltransferase B complex (NatB) non catalytic subunit 303 632 IPR019183 -
Lja6g1029 1013 Gene3D - 13 331 - -
Lja6g1029 1013 ProSiteProfiles TPR repeat profile. 231 264 IPR019734 GO:0005515
Lja6g1029 1013 PANTHER N-ALPHA-ACETYLTRANSFERASE 25, NATB AUXILIARY SUBUNIT 1 1012 IPR019183 -
Lja6g1029 1013 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 1012 - -
Lja6g1029 1013 SUPERFAMILY TPR-like 24 279 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1029 K17973 - gmx:100808947 1669.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1029 6 24057502 24072854 Lja6g1029 6 24057502 24072854 ECH
Lja6g1029 6 24057502 24072854 Lja6g0345 6 8830978 8835077 ECH