Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0952 ATGAATACGGAAAATATAAATAATGAGCCCCAAACATATGAATTAAAAGACATGGGTCACGCTAATGAAAAAAATAACATTGTTGATGCCAATCAGAAGGCTATTGATGATTGGCTCCCGATAACGGGTTCTAGGGAAGCAAAATGGTACTACTCAGCTTTTCATAATCTCACGGCCATGGTTGGAGCTGGTGTCCTCAGCCTTCCTTATGCTATGTCACATATGGGCTGGGGTCCCGGCACTACTATCCTTACCTTGTCATGGGTGATCACGTTGTACACACTATGGCAAATGGTTGAGATGCACGAAATGGTTCCTGGCAAGAGATTCGACAGGTACCATGAGTTAGGGCAGTATGCGTTTGGGGAGAAGTTGGGTATGTATATCGTGGTTCCTCAGCAAATTATTGTTGAAGTTGGCACGTGCATTGTGTACATGGTCACTGGAGGAAAGTCACTGAAGAAGGTTCATGATTCTCTCTGTCCCGATTGCAAAGATATTAAGACTTCATATTGGATAATCATCTTTGCCTCAGTGAACCTCGTTATTTCCCAATGCCCGAACTTGAACTCTATTTCCATTGTCTCTCTTGGCGCAGCCGCCATGTCCCTCACGTACTCAACTATCGCTTGGGGTACTTCTATTAAAAAAGGGATCGAACCAAACGTAGACTATAGTATTAAATCACACAGTACCGCTGATGCAATATTCAACTTTCTTTCTGCGTTGGGAGATGTAGCATTTGCTTATGCAGGTCACAATGTGGTTCTGGAAATTCAAGCAACGATGCCTTCATCGCCAGAGGTTCCTTCCAAGAAACCCATGTGGAGGGGAGTTATTTTGGCCTACATAGGAGTTGCCTTCTGCTACTTCCCTGTTGCTCTGATCGGATACTACATGTTTGGAAATGCGGTTGATGATAACATCCTCATCACACTAGAGCGCCCTGTTTGGCTCATTGCTGCAGCTAACCTTTTTGTTGTTCTTCATGTTATTGGAGGTTACCAAATATTTGCAATGCCAATGTATGATATGCTCGAAACCTTCTTGGTTAAGAAAGTAAAGATTCCACCTTCCTTTACACTTCGACTAATAACTCGAAGTGTTTATGTTGGCTTGACAATGCTTGTTGGCATAAGCGTCCCTTTCTTTGGTTCTCTTCTTGGATTTCTTGGAGGGTTTGCCTTTGCCCCAACATCATACTTCCTTCCTTGTATTATATGGCTTAAACTAAAAAAACCCAAGATATTTAGCTTGTCTTGGATTATAAATTGGATTTGCATTATTCTTGGTGTATTGTTGATGACATTATCTCCGATCGGTGCCATGAGGAATATCATCCTATCAGCGACGAACTACAAGTTCTTTTCATAA 1374 0.4207 MNTENINNEPQTYELKDMGHANEKNNIVDANQKAIDDWLPITGSREAKWYYSAFHNLTAMVGAGVLSLPYAMSHMGWGPGTTILTLSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGMYIVVPQQIIVEVGTCIVYMVTGGKSLKKVHDSLCPDCKDIKTSYWIIIFASVNLVISQCPNLNSISIVSLGAAAMSLTYSTIAWGTSIKKGIEPNVDYSIKSHSTADAIFNFLSALGDVAFAYAGHNVVLEIQATMPSSPEVPSKKPMWRGVILAYIGVAFCYFPVALIGYYMFGNAVDDNILITLERPVWLIAAANLFVVLHVIGGYQIFAMPMYDMLETFLVKKVKIPPSFTLRLITRSVYVGLTMLVGISVPFFGSLLGFLGGFAFAPTSYFLPCIIWLKLKKPKIFSLSWIINWICIILGVLLMTLSPIGAMRNIILSATNYKFFS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0952 457 Pfam Transmembrane amino acid transporter protein 47 442 IPR013057 -
Lja6g0952 457 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 26 452 - -
Lja6g0952 457 PANTHER OS05G0424000 PROTEIN-RELATED 26 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0952 Lja-Chr6 21226801 21230255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0952 18 457 Organic Solute Cotransporters AT1G24400 72.336 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0952 - - gmx:100786115 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0952 6 21226801 21230255 Lja4g1071 4 9280258 9283852 PCT