Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1071 ATGAACTTCACAGTTTGTATATTATGGCAAAAGAAAGAAAGAAAGAAAGAAAGAAAGATGGAGAATGAAAATGCAATTGCTGCAAGGAAAGGAGTTGATGATTGGCTTCCTGTCACTGCCTCCAGAGATGCAAAATGGTGGTCCTCAGCTTTCCACAATCTCACTGCCATGGTTGGTGCTGGTGTCCTCAGCCTTCCTTATGCCATGTCTATGATGGGCTGGGGTCCTGGCGCAGTGATACTGATACTGTCATGGATCATCACCTTGTTCACTCTCTGGCAAATGGTTGAGATGCACGAAATGACACCGGGAGTGCGATATGACCGGTACCACGAGCTAGGCCAGGCTGCATTTGGCGAGAAGCTGGGTCTCTGGATCGTGTGTCCACAACAGCTAACTGTTGAGGTTGGAACATGCATTGCCTACATGGTTACTGGTGGCAAATCACTGCAGAAGTTTCACAACACTGTTTGTCCCTCTTGTAAAGACATCAGAACCTCCTACTGGATTATTATCTTTGCTTCTGTGAACTTCGTTCTCTGCCAATGCCCCAGCTTCAACTCAATTTCCTTCATCTCGCTTCTCGCCGCGATCATGTCCCTCGCTTACTCAACCATTGCTTGGGGGGCTTCCATCGAAAGAGGTGTTAAACCAGATGTGGACTATGGATACAAAGCCCACAGCACTGCTGATGGTGTGTTCAACTTCTTCTGTGCCATGGGAGAAGTAGCATTCTCTTATGCAGGTCACAATGTGGTTCTAGAAATCCAAGCAACAATGCCTTCAACTCCTGAGAAGCCATCAAAGAAACCAATGTGGAAAGGGGTTGTTGTTGCTTATATTGGAGTGGCTTTCTGCTACCTCCCTGTTGCCTTCATTGGATACTACGTATTTGGAAACTCTGTTGATGATAACATCCTCATCACATTAGAGCACCCCACTTGGCTCATTGCTGCAGCTAACATGTTTGTTATTATCCATGTTATTGGTGGCTACCAGGTATTCTCAATGCCTGTGTTTGATATGATTGAAACCTACCTGGTGAAGCACTTAAAGTTATCTCCTTCGTTTACCCTTCGCTTAGTCGCTCGCACGACATTCGTAGGGTTGACCATGATAATTGGCATATGCATCCCATTCTTTGGTGCTCTTCTTGGATTTCTTGGAGGATTTGCCTTTGCCCCAACATCATACTTTCTGCCTTGTATTGTATGGCTTAAAGTCAAGAAACCCAAGAGATTTGGCTTGTCTTGGTTTGTCAACTGGACTTGCATTGTGCTTGGAGTACTACTGATGACACTATCCCCAATTGGTGCACTGAGAAAGATCATTATTTCTGCAAAAGACTACAAATTCTTCTCATGA 1365 0.4498 MNFTVCILWQKKERKKERKMENENAIAARKGVDDWLPVTASRDAKWWSSAFHNLTAMVGAGVLSLPYAMSMMGWGPGAVILILSWIITLFTLWQMVEMHEMTPGVRYDRYHELGQAAFGEKLGLWIVCPQQLTVEVGTCIAYMVTGGKSLQKFHNTVCPSCKDIRTSYWIIIFASVNFVLCQCPSFNSISFISLLAAIMSLAYSTIAWGASIERGVKPDVDYGYKAHSTADGVFNFFCAMGEVAFSYAGHNVVLEIQATMPSTPEKPSKKPMWKGVVVAYIGVAFCYLPVAFIGYYVFGNSVDDNILITLEHPTWLIAAANMFVIIHVIGGYQVFSMPVFDMIETYLVKHLKLSPSFTLRLVARTTFVGLTMIIGICIPFFGALLGFLGGFAFAPTSYFLPCIVWLKVKKPKRFGLSWFVNWTCIVLGVLLMTLSPIGALRKIIISAKDYKFFS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1071 454 Gene3D Amino acid/polyamine transporter I 39 448 - -
Lja4g1071 454 Pfam Transmembrane amino acid transporter protein 44 439 IPR013057 -
Lja4g1071 454 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 23 449 - -
Lja4g1071 454 PANTHER OS05G0424000 PROTEIN-RELATED 23 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1071 Lja-Chr4 9280258 9283852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1071 22 454 Organic Solute Cotransporters AT1G24400 71.594 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1071 - - gmx:100786115 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1071 4 9280258 9283852 Lja4g1071 4 9280258 9283852 ECH
Lja6g0952 6 21226801 21230255 Lja4g1071 4 9280258 9283852 PCT