Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0526 ATGATCATGGCAAACACTAGTCATGAAGGGGATTCCAGTGAGCCATGTGAGGGTTTGGTAAGCTTTCAGAAGGAAACTGAACCCCAGAGCCAGGAAATTGTTGATTTGCAGCAAAAACTCAATGACAAAGCTGCAGTTATTAGCAAACTCAAAGAATCTCTGGACATGGTCATGAATATGACTGACAAAGAGTATAAGCTGCATCAGGAATGTGGAAAGCTGAGAGGATTATTAGATGAGTTGAAGCATGTGGAAGATGATGAAGATGCAAAAATTCTGAAGAAGATAGATGCTTTACAGAAGGGTTTAAGTGAAAAGGAAGAGTCACTTGAAGACTTAGATGCATTGAACCACTGCCTAATCTCTGTAGAGCGCAAGAATTTTGATGAGCTTCAAGAAGCCCGAAATGAATTGATTAATGATGACATTATGGAGAAGAAGTCAAAATATGTTCGTATTGGAGTTAAGAGAATGGGGGAGATTGACACTAGACCCTTCCTTGAAGCAATGAAGGAAAGATATAATGAGGAAGAAGCTGCAGTGAGAGCTTCAGAACTGAGTTCAATGTGGGCAGATTATCTGAAGGACACCAATTGGCATCCATTCAAAGTTGTCACAATTGAAGGGAAAGAAAAGGAGATTATTGATGATGACGATGAAAAGCTGAATGGTCTCAAAAATGACATTGGTGAAGGGGCATACAATGCTGTTGTGACTGCTTTAGTAGAGTTCAATGAATATAATCCTAGTGGGCGATACGTAACCAAAGAATTATGGAACTATAGAGAGGGAAGGAGAGCAACTCTGAAAGAAGCAATTCAGGATCTTATCAGGAAAAGGAAAATGAGCCAGAGACACTAG 861 0.3984 MIMANTSHEGDSSEPCEGLVSFQKETEPQSQEIVDLQQKLNDKAAVISKLKESLDMVMNMTDKEYKLHQECGKLRGLLDELKHVEDDEDAKILKKIDALQKGLSEKEESLEDLDALNHCLISVERKNFDELQEARNELINDDIMEKKSKYVRIGVKRMGEIDTRPFLEAMKERYNEEEAAVRASELSSMWADYLKDTNWHPFKVVTIEGKEKEIIDDDDEKLNGLKNDIGEGAYNAVVTALVEFNEYNPSGRYVTKELWNYREGRRATLKEAIQDLIRKRKMSQRH* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0526 286 Coils Coil 33 53 - -
Lja6g0526 286 PANTHER RIBONUCLEASE P SUBUNIT P38 65 284 IPR045177 GO:0080188
Lja6g0526 286 Pfam XH domain 156 285 IPR005379 -
Lja6g0526 286 Coils Coil 96 116 - -
Lja6g0526 286 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 65 284 - -
Lja6g0526 286 Coils Coil 167 187 - -
Lja6g0526 286 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0526 Lja-Chr6 12682094 12684542 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0526 - - lja:Lj0g3v0241319.1 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0526 6 12682094 12684542 Lja6g0526 6 12682094 12684542 ECH
Lja6g0529 6 12697224 12705270 Lja6g0526 6 12682094 12684542 PCT