Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0436 ATGTTTTCCCTGAAGCAAGGTGAAGAGGCAATCATGCCAAGCCTCAACCAAATGGTGGAGCGTGAGGAGGGGGAGGATGTGAAGGAGGAGAAATCACGTTTCAGCTTCAAAAACTTTCTCTGGCATGGTGGCTCTGCCTATGATGCCTGGTTCAGCTGTGCCTCAAATCAGGTTGCTCAGGTTCTGTTAACTCTGCCTTACTCTTTCTCTCAGCTGGGAATGCTTTCAGGGATCATATTCCAAGTCTTCTATGGCTTGCTTGGAAGTTGGACTGCTTATTTAATTAGCATTCTGTACATTGAGTTCAGAAGCCGGAAAGAGAAAGAGAATGTCAATTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGGTTATTGGGACCATACTGGAAAGCTGTTGGATTGGCCTTCAATTGCACTTTTCTCCTCTTTGGTTCTGTAATTCAGCTCATAGCTTGTGCAAGTAACATTTACTACATTAATGACAACTTGGACAAGAGAACTTGGACCTACATTTTTGGAGCTTGCTGTGCCACCACAGTGTTCATACCCTCATTCCACAACTACAGGATTTGGTCCTTCCTTGGCCTAGGCATGACCACCTACACTGTTTGGTACATGACCATTGCAGCCCTTGTTCATGGCCAGGTTGAAAATGTCACTCACTCGGGCCCAAACAAGTTGGTTTTGTATTTCACAGGTGCCACAAACATCTTATACACTTTCGGCGGGCATGCTGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAATTCAAATACATATATTTCTATGCTACTCTTTATGTGTTCACCCTCACCCTACCGTCAGCTATTTCCGTTTACTGGGCCTTTGGTGACCAACTTCTGGATCACTCCAATGCCTTCTCTCTCCTCCCCCGCAACGGCTGGCGTGACTCTGCTGTCATCCTAATGCTCATCCACCAGTTCATCACCTTCGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAGGAGCATTTTTTTGAGGGCTATAGCCCGGTTACCTGTGGTTATACCCATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGTCCCATTAACTCAGCTGTGGGAGCCCTTTTGGTCAGTTTCACAGTTTACATCATCCCTGCATCTGCTCATATGCTCACCTTTAAGTCTGCCTCTGCAAGACAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCTAACTGGACTTTCATGTACGTGGTGAATGCATTTGTGGTGATTTGGGTTCTGGTGGTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAACTTCATCAAGCAGGTTGATACATTTGGACTATTTGCCAAGTGCTACCAATGCCCTCCAAAAGTACTACCCTCCAACCACACCTTGCCGCATCATTAA 1440 0.4569 MFSLKQGEEAIMPSLNQMVEREEGEDVKEEKSRFSFKNFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQVFYGLLGSWTAYLISILYIEFRSRKEKENVNFKNHVIQWFEVLEGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTVWYMTIAALVHGQVENVTHSGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYFYATLYVFTLTLPSAISVYWAFGDQLLDHSNAFSLLPRNGWRDSAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSIFLRAIARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFKSASARQNAAEKLPFFIPNWTFMYVVNAFVVIWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKVLPSNHTLPHH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0436 479 PANTHER AUXIN INFLUX TRANSPORTER 4 468 - -
Lja6g0436 479 PANTHER OS05G0424000 PROTEIN-RELATED 4 468 - -
Lja6g0436 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0436 Lja-Chr6 10596997 10602296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0436 4 465 Organic Solute Cotransporters AT2G21050 77.754 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0436 K13946 - gmx:100795466 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0436 6 10596997 10602296 Lja1g3416 1 42580778 42586972 ECH
Lja6g0436 6 10596997 10602296 Lja6g0436 6 10596997 10602296 ECH
Lja6g0436 6 10596997 10602296 Lja6g0436 6 10596997 10602296 PCT