Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0331 ATGCCACGTCATCACCCAAAACAGCGCTCACGTAGTCTCACCCGCACCAGATCAAAACCAACACCATCCAACCACGCTATAAAAACCCCTAAACAAGCCTCAACCAATTACCAAACTCGAAGAAGAAATCACCACCATTTTCTCTTCATAACCAAAAACCTCTTTCTCGAACTGGCTAACCCTCAAGATTCCTCCTCCGATTCCAGCAACCAGAGGCTGGTTCTCACCCTCTATGACGCCTTGAACGCTCGAGACTCCGACACTGTCGTCAACACCGTTGCTCCAGATCTCGAGTGGTGGTTTCACGGCCCACCCTCTCACCAGTTTTTGATGCGCATGCTCACCGGCGAGGACTCCTCCTCCTCCTCCTCCGACACCGACACCACCGCCTTCCGATTCGTTCCGCAGTCGCTCGCGTCGTTCGGATCCACCGTCATAGTCGAAGGCTGCGACACCTCACGCGCCATTTCGTGGGTTCACGCGTGGACTGTCTCGGATGGGATAATTACCCAGGTTAGGGAGTATTTCAACACTGCCCTCACTGTTACTCGCTTCTCCAAATCCGGGTCGCCGGAGATTGTCCCGGCGGAGAACCGCTCCGGCAGCTTCCCGTGTGTTTGGGAGAGTAGCGTCTCCGATCGGGTCGGGAAATCCGTACCCGGTTTGGTTCTCGCTATTTAA 681 0.5477 MPRHHPKQRSRSLTRTRSKPTPSNHAIKTPKQASTNYQTRRRNHHHFLFITKNLFLELANPQDSSSDSSNQRLVLTLYDALNARDSDTVVNTVAPDLEWWFHGPPSHQFLMRMLTGEDSSSSSSDTDTTAFRFVPQSLASFGSTVIVEGCDTSRAISWVHAWTVSDGIITQVREYFNTALTVTRFSKSGSPEIVPAENRSGSFPCVWESSVSDRVGKSVPGLVLAI* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0331 226 PANTHER SENESCENCE ASSOCIATED GENE 20 52 226 - -
Lja6g0331 226 PANTHER OS07G0691300 PROTEIN 52 226 IPR009798 -
Lja6g0331 226 SUPERFAMILY NTF2-like 68 183 IPR032710 -
Lja6g0331 226 MobiDBLite consensus disorder prediction 1 38 - -
Lja6g0331 226 Gene3D - 59 187 - -
Lja6g0331 226 MobiDBLite consensus disorder prediction 15 37 - -
Lja6g0331 226 Pfam Wound-induced protein WI12 111 226 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0331 Lja-Chr6 8385074 8386375 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0331 - - lja:Lj0g3v0040339.1 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0331 6 8385074 8386375 Lja1g3310 1 41141921 41143049 ECH
Lja6g0331 6 8385074 8386375 Lja6g0331 6 8385074 8386375 ECH
Lja1g3310 1 41141921 41143049 Lja6g0331 6 8385074 8386375 ECH