Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g3310 | ATGGAAATCAATGCAAAGGTTGAAATCCAAAACAAGGCAACAGTTGAAATGCTCTACAAGGCCCTTTTGGGACAAGAAGGATTAACAATGGACACGGTGGCCAAATTGCTAGCAAGCGACCTTGAGTGGTGGTTCCACGGTCCGCCTCAGTGCCAACACATGATGAGGGTTCTCACAGGTGAAACAGCCCTTAACAAAGGTTTCAAGTTCGAGCCTCGCAGCGTGACAACCATCGGTGACTCCGTGATCACCGAAGGGTGGGAGGGGCAGGCCTATTGGGTCCACGTTTGGACACTGAAAAATGGCCTCATCACTCAGTTCAGAGAGTATTTCAATACATGGCTTGTGGTGAAGGATTTGAGGCCTCCAAGCCCAAGAACCTGGGAAGATAAACAAGATAGCTTCACATTGTGGCAGAGCCAGCCTCGTGACCTATATCGCCGGTCACTGCCTGGACTTGTCTTAGCCATTTAG | 474 | 0.4979 | MEINAKVEIQNKATVEMLYKALLGQEGLTMDTVAKLLASDLEWWFHGPPQCQHMMRVLTGETALNKGFKFEPRSVTTIGDSVITEGWEGQAYWVHVWTLKNGLITQFREYFNTWLVVKDLRPPSPRTWEDKQDSFTLWQSQPRDLYRRSLPGLVLAI* | 158 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g3310 | 157 | Gene3D | - | 2 | 123 | - | - | |
| Lja1g3310 | 157 | PANTHER | OS05G0342100 PROTEIN | 8 | 157 | - | - | |
| Lja1g3310 | 157 | PANTHER | OS07G0691300 PROTEIN | 8 | 157 | IPR009798 | - | |
| Lja1g3310 | 157 | Pfam | Wound-induced protein WI12 | 55 | 157 | IPR009798 | - | |
| Lja1g3310 | 157 | SUPERFAMILY | NTF2-like | 10 | 123 | IPR032710 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g3310 | Lja-Chr1 | 41141921 | 41143049 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g3310 | - | - | ccaj:109798074 | 260.381 |
Event-related genes