Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0043 ATGGTGAGTGAGTACACACAAGATGGAACTGTGGATCTTAAAGGAAAACCTGTTCTCAAATCCAAAACAGGTGCCTGGAAAGCTTGCTCCTTAATTGTTGTGTACGAGATATTTGAAAGAATGGCTTATTATGGGATTTCATCAAATTTGATCTTGTATCTGACGACAAAGCTTCACCAAGGCACTGTAACATCTTCCAACAATGTCACCAATTGGGCTGGTATCATTTGGCTAACTCCCATATTAGGAGCTTATGTTGCAGATGCTCACCTTGGCCGCTATTGGACTTTTGTCATTGCCTCCTTTATCTATTTATCGGGTATGTGTCTGCTTACCCTATCAGTTTCCCTTCCAAGCCTAAAGCCACCTGAGTGCTATGAAAAGGATGTGACAAGATGCAAAGAAGCCTCCACATTACAGCTAGCTGTGTTCTATGGCGCACTCTACATTTTAGCAGTGGGAACTGGTGGAACCAAACCCAACATTTCCACTATTGGTGCTGACCAGTTTGATGATTTTGACCCCAAAGAGAAGGCACAAAAGTTGTCATTCTTCAACTGGTGGTTCTCCAGCATCACCATAGGGACCCTCTTTGCAATTTGTGCTCTAGTCTACATACAAGATAATGTGGGATGGACTCTTGGTTATGGTCTTCCAACTATTGGTCTTGCAATTGCAATTATCATATTTCTTGCAGGCACACCCTTCTATAGACACAAAATTCTCTCAGGGAGTCCCTTCACTAAAATGGCTAAGGTCATAGTAGCATCTGTAAGGAAATGGAAAGTGCCTCTTCCTAGAGACTCTAAAGAGCTATATGAGCTTGATTTGGAAGAGTATGCAAAGGAAGGGACATTTAGAATTAAACCCACTCCAACATTAAGGTTCCTCAACAAGGCTTGTGTAATAACTGGTTCAAGTACTAGTAGTAGTAAATGGATCCTATGCTCAGTTACACAGGTAGAGGAGACTAAGCAAATGCTAAGGATGATCCCCATCTTGGTTGCTACATTCCTTCCTAGTACAATTTTTGCTCAGATAAATACCCTCTTTGTAAAGCAAGGAACTACACTTGATAGAGGCATTGGCAAATTCAATGTCCCCCCAGCAAGTTTAATTGCATTTGCATGTCTGTCATTTCTTATCACTGTTGTTCTCTACGACCGTTTCTTTGTCAAGATTATGCAAAGATTGACTAAGAACCCTAGAGGGATTACTCTGCTTCAAAGGATGGGCACAGGAATCATAATCCACATAGTGAATATAATAGTTGCTGCTTTGATTGAAAGATATAGACTTAGTGTGGCAAAACAGCATGGGCTAGTTGAAAATGGAGGACAGGTTCCATTGAGCATATTCATCTTGGCTCCTCAGTTTACACTTATGGGAATAGCTAATGCTTTCTTAGAGGTTGCAACAATTGAGTTCTTCTATGACCAGGCCCCAGAAAGCATGAAGAGCCTGGGCACTTCCTATTCATTGACTTCATCAGGCATTGGATATTTCCTCAGCACTGTTATTCTCTCAACAGTTTCACATGTCACCCAAAAACATGGCCACAAAGGCTGGATTTTGAACAACCTGAATGCTTCTCATCTTGATTACTACTACATGTTTTTGGCAATACTGAATATCCTGAACTTCATCTTTTTCATGATTGTCACAAAGTTCTATGTGTATAGGGCTGAAGTTTCAGATTCCCTGAAGGTGCTTGAAGCTGAACTGGAGGAGAAAATGACCTCTGTGCCAAAACAGGCGAGTCCAAGTGATTAG 1773 0.4123 MVSEYTQDGTVDLKGKPVLKSKTGAWKACSLIVVYEIFERMAYYGISSNLILYLTTKLHQGTVTSSNNVTNWAGIIWLTPILGAYVADAHLGRYWTFVIASFIYLSGMCLLTLSVSLPSLKPPECYEKDVTRCKEASTLQLAVFYGALYILAVGTGGTKPNISTIGADQFDDFDPKEKAQKLSFFNWWFSSITIGTLFAICALVYIQDNVGWTLGYGLPTIGLAIAIIIFLAGTPFYRHKILSGSPFTKMAKVIVASVRKWKVPLPRDSKELYELDLEEYAKEGTFRIKPTPTLRFLNKACVITGSSTSSSKWILCSVTQVEETKQMLRMIPILVATFLPSTIFAQINTLFVKQGTTLDRGIGKFNVPPASLIAFACLSFLITVVLYDRFFVKIMQRLTKNPRGITLLQRMGTGIIIHIVNIIVAALIERYRLSVAKQHGLVENGGQVPLSIFILAPQFTLMGIANAFLEVATIEFFYDQAPESMKSLGTSYSLTSSGIGYFLSTVILSTVSHVTQKHGHKGWILNNLNASHLDYYYMFLAILNILNFIFFMIVTKFYVYRAEVSDSLKVLEAELEEKMTSVPKQASPSD* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0043 590 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 570 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja6g0043 590 SUPERFAMILY MFS general substrate transporter 19 556 IPR036259 -
Lja6g0043 590 CDD MFS_NPF5 26 560 IPR044739 GO:0042937|GO:0042938|GO:0071916
Lja6g0043 590 PANTHER PEPTIDE TRANSPORTER 11 570 - -
Lja6g0043 590 Pfam POT family 94 524 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja6g0043 590 Gene3D MFS general substrate transporter like domains 2 566 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0043 Lja-Chr6 828288 830878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0043 3 574 Organic Solute Cotransporters AT5G46040 64.286 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0043 - - gmx:100775227 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0043 6 828288 830878 Lja6g0043 6 828288 830878 ECH
Lja1g1003 1 9957918 9960428 Lja6g0043 6 828288 830878 PCT