Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0042 ATGGAAGAGGGCAGGGTTGTAAGTGAGTACACACAAGATGGAAGTGTGGATCTTAAAGGGAAACCTGCTCACAAATCCAAAACCGGTGGTTGGAAAGCTTGCTCCTTTGTTGTTGTGTATGAGATATTTGAAAGAATGGCTTATTATGGAATATCATCAAATTTGATCCTGTATCTGACAACGAAGCTTCACCAAGGAGTAGTGAGTTCTTCCAACAATGTTACTAATTGGGCTGGCACCATTTGGATAACTCCCATCTTAGGTGCTTACATTGCTGATGCTAAACTTGGTCGCTATTGGACTTTTGTCATTGCCTCCGTTGTCTATCTCTTGGGTATGTGTCTGCTTACTCTATCAGTTTCCCTTCCAAGCCTAAAGCCACCTCAGTGCCATGAAATTAATGTCACAAAATGTGAAAAAGCCTCTACACTACAGCTAGCAGTGTTCTATGGTGCTCTCTACACTCTAGCAGTAGGAACTGGTGGAACCAAGCCCAATATTTCCACCATTGGTGCTGACCAGTTTGATGATTTTGACCCCAAAGAGAAGAGGCATAAACTATCCTTCTTCAATTGGTGGATGTTCAGCATCTTCATTGGGACCCTCTTTGCAAATTCTGTTCTAGTCTATGTTCAAGATAATGTGGGGTGGACTCTTGGGTATGGTCTTCCCACTCTTGGTCTTGCAATATCAATCATCATATTCTTGGCAGGCACACCCTTCTACAGACACAGGTTACCCACAGGGAGTCCCTTCACTAGAATGGCCAAGGTCATAGTTGCTGCTATTAGGAAATGGAAAGTGCCTCTTCCTAGTGACCCTAAAGAACTATATGAGCTTGATTTGGAAGAGTATGCAAAGCAAGGGAAAGTCAGAATTGATTCCACTCCAACATTAAGGTTCCTCAACAAGGCTTGTGTCAAAACTGGTACATGTACTAATGCAGGGGTGCTATGCCCAGTTACACAAGTAGAGGAGACCAAACAGATGCTAAGAATGATCCCTATCTTGATTGCTACCTTCATTCCTAGTACAATGGTTGCTCAGATAAGTACCCTTTTTGTGAAGCAAGGAACTACACTGGATAGAGGCATTGGCAACTTCAACATTCCACCAGCAAGTTTAGGTACATTTGTGACTCTGTCAATGCTTGTCAGTGTTGTGCTCTATGATCGTTTCTTTGTCAAGATTATGCAGAGATTGACTAAGAACCCAAGAGGGATTACTCTTCTTCAAAGAATGGGCATAGGAGTCATAATCCACATAGTGATTATGGTAGTTGCAGCTTTGACTGAAAGATACAGACTTAGTGTGGCAAAACAACATGGGCTAGTTGAAAGTGGAAAACAGGTTCCATTGAGCATATTCATCTTGCTTCCTCAGTTTATACTAATGGGAACTGCTGATGCATTCTTAGAAGTTGCCAAAATAGAGTTCTTCTTTGACCAAGCCCCAGAAAGCATGAAGAGCCTTGGCACTTCATATTCAATGACTTCCTTAGGCATTGGAAATTTCCTCAGTACTTTTGTTCTCTCAACAGTTTCACATGTCACCAAGGAACATGGTCACCAAGGATGGGTTTTGAACAATCTAAATGCTTCTCATCTTGATTACTACTACATACTTCTGGCAATACTTAACTTCCTGAACTTCATCTTCTTCATCATTGTTTCAAAGTTCTATGTATACAGGGCTGAAGTTTCAGATTCCATAAAAGTGCTTGGGGAAGAACTGAAGGAGAGGTCAGTCATTGTGTCAAACCAAGTGATTCCAAAGGATTAA 1782 0.4158 MEEGRVVSEYTQDGSVDLKGKPAHKSKTGGWKACSFVVVYEIFERMAYYGISSNLILYLTTKLHQGVVSSSNNVTNWAGTIWITPILGAYIADAKLGRYWTFVIASVVYLLGMCLLTLSVSLPSLKPPQCHEINVTKCEKASTLQLAVFYGALYTLAVGTGGTKPNISTIGADQFDDFDPKEKRHKLSFFNWWMFSIFIGTLFANSVLVYVQDNVGWTLGYGLPTLGLAISIIIFLAGTPFYRHRLPTGSPFTRMAKVIVAAIRKWKVPLPSDPKELYELDLEEYAKQGKVRIDSTPTLRFLNKACVKTGTCTNAGVLCPVTQVEETKQMLRMIPILIATFIPSTMVAQISTLFVKQGTTLDRGIGNFNIPPASLGTFVTLSMLVSVVLYDRFFVKIMQRLTKNPRGITLLQRMGIGVIIHIVIMVVAALTERYRLSVAKQHGLVESGKQVPLSIFILLPQFILMGTADAFLEVAKIEFFFDQAPESMKSLGTSYSMTSLGIGNFLSTFVLSTVSHVTKEHGHQGWVLNNLNASHLDYYYILLAILNFLNFIFFIIVSKFYVYRAEVSDSIKVLGEELKERSVIVSNQVIPKD* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0042 593 CDD MFS_NPF5 31 563 IPR044739 GO:0042937|GO:0042938|GO:0071916
Lja6g0042 593 SUPERFAMILY MFS general substrate transporter 22 559 IPR036259 -
Lja6g0042 593 Gene3D MFS general substrate transporter like domains 4 569 IPR036259 -
Lja6g0042 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 573 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja6g0042 593 PANTHER PEPTIDE TRANSPORTER 15 573 - -
Lja6g0042 593 Pfam POT family 99 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0042 Lja-Chr6 816306 825123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0042 1 577 Organic Solute Cotransporters AT5G46040 66.667 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0042 - - gmx:100775227 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1002 1 9953585 9956117 Lja6g0042 6 816306 825123 PCT