Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1002 ATGTCAGTGGTAGATGAAAAAGGCCTTCCAAGCGGGAAGGAAGATTACACTCAAGATGGCACTGTGGACCTCAAAGGTAGACCAGTTTTAAGGTCAAAAACTGGATCGTGGAAAGCTTGTACCTTCATAGTAGGGTATGAGTTGTTTGAGAGGATGGCTTACTATGGGATATCATCAAACTTGGTGGTGTTTCTAGGGAGTAAACTTCATGAGGGTACTGTGGCATCTTCAAACAACGTTAGCAACTGGGCTGGTGTTGTGTGGACGACACCCCTTGTAGGAGCTTACATAGCTGATGCCTATCTTGGTCGATACTGGACCTTTATAATTGCGTCATGCATTTATCTTTTGGGAATGTGTTTATTGACACTAACAGTATCACTACCAGCACTGCGGCCACCACCATGTGCTCAAGGTGTAGAAAACCAGGATTGTCCACAGGCATCGCCGTGGACAAGAGGTATTTTCTACCTTGCCTTGTACATCATTGCACTAGGTGCTGGGGGAACCAAGCCCAACATTTCTACCATGGGGGCAGACCAATTTGACGAGTATGAACCTAAGGAGAATACATATAAGCTTTCCTTCTTCAATTGGTGGGTTTTTAGCATCCTAGTTGGTGTCCTTTTCTCCACCACTGTCTTGGTTTACATACAAGATAATTTGAGTTGGTCCCTTGGGTATGGCCTTCCAACCGTTGGGCTAGCTTTTTCAATATTGGTGTTTCTGGTAGGAACTCCATTTTACAGGCACAAATTGCCCTCAGGCAGCCCTTTAACAAGGATGCTTCAGGTTTTTGTTGCTGCTGGAATAAAGTGGAAGGCACATGTCCCACATGATCCAAAACAGCTACATGAGCTTAGCATGGAAGAGTATGCAAATAACAGCAGAAACAGAATTGATCACACTTCCACATTAAGATTCCTTGATAAAGCAGCTGTAAAGACAGGCAAAACTTCTCCATGGAGGCTTTGTACAGTGACCCAAGTAGAGGAAACCAAGCAAATGACAAAAATGGTTCCTATTTTGATCACAACACTCATTCCATGCACCATGCTAATTCAAGCACACACATTATTCATCAAACAAGGAACCACGCTAGACAGGAGTATGGGACCCAATTTTGAAATACCTCCAGCAGGACTTTCGGCAATTCTGATTATCAGCATGTTGACAAGCATTCCAATCTACGACCGTGTTTTTGTTCCGGTGATCCGGCGGTACACAAAGAACCCCAGAGGGATCACAATGCTGCAGAGACTGGGAGCTGGCCTTCTGATGTATGTTCTTATAATGGTCATTGCATGGTTGACTGAGAGGAAAAGACTCAGAGTTGCTAGAGAAAAGCACCTCCTAGGCCAACATGATATAATTCCTCTTTCTATTTTCATCCTCATCCCTCAGTATGCCTTGACAGGGGTAGCTGAAAACTTCGCCGAAATTGCCAAGATGGATTTCTTCTATTATCAAGCACCAGAAGGCATGAAAAGCCTTGGAATATCATATTCCACAACCAGCGTAGCTTTAGGATGTTTTCTCAGTAGTTTTCTTCTGTCAACTGTTGCTGATATCACCAAGAAACACAGTCACCAGGGTTGGATTTTGGATAATCTAAACATCTCCCGTTTAGATTATTATTATGCATTCATGGTGATACTGAGCTTCCTGAACTTTCTTTGCTTTCTGGTTACTGCGAAGTTCTTTGATTATAATGTTGATGTAACTCACGAAAAATCAGGCTCAGAGCTGAACCCTGCATCTCTGGACAATGCTAGAATATGCCAGGGCAGTGAAAGCACTGCACAGCCAGATGCCAAGTAG 1821 0.4355 MSVVDEKGLPSGKEDYTQDGTVDLKGRPVLRSKTGSWKACTFIVGYELFERMAYYGISSNLVVFLGSKLHEGTVASSNNVSNWAGVVWTTPLVGAYIADAYLGRYWTFIIASCIYLLGMCLLTLTVSLPALRPPPCAQGVENQDCPQASPWTRGIFYLALYIIALGAGGTKPNISTMGADQFDEYEPKENTYKLSFFNWWVFSILVGVLFSTTVLVYIQDNLSWSLGYGLPTVGLAFSILVFLVGTPFYRHKLPSGSPLTRMLQVFVAAGIKWKAHVPHDPKQLHELSMEEYANNSRNRIDHTSTLRFLDKAAVKTGKTSPWRLCTVTQVEETKQMTKMVPILITTLIPCTMLIQAHTLFIKQGTTLDRSMGPNFEIPPAGLSAILIISMLTSIPIYDRVFVPVIRRYTKNPRGITMLQRLGAGLLMYVLIMVIAWLTERKRLRVAREKHLLGQHDIIPLSIFILIPQYALTGVAENFAEIAKMDFFYYQAPEGMKSLGISYSTTSVALGCFLSSFLLSTVADITKKHSHQGWILDNLNISRLDYYYAFMVILSFLNFLCFLVTAKFFDYNVDVTHEKSGSELNPASLDNARICQGSESTAQPDAK* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1002 606 SUPERFAMILY MFS general substrate transporter 28 571 IPR036259 -
Lja1g1002 606 MobiDBLite consensus disorder prediction 1 20 - -
Lja1g1002 606 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 19 581 - -
Lja1g1002 606 CDD MFS_NPF5 37 570 IPR044739 GO:0042937|GO:0042938|GO:0071916
Lja1g1002 606 Pfam POT family 105 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g1002 606 Gene3D MFS general substrate transporter like domains 8 576 IPR036259 -
Lja1g1002 606 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1002 Lja-Chr1 9953585 9956117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1002 14 590 Organic Solute Cotransporters AT5G46040 58.895 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1002 - - lja:Lj1g3v4515810.1 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1002 1 9953585 9956117 Lja1g1002 1 9953585 9956117 ECH
Lja1g1002 1 9953585 9956117 Lja6g0042 6 816306 825123 PCT