Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3025 ATGGAGACTAGTAGTGGAGATAACATTCTAGATGCTATCTACGAAGAGGATTACTTAGATGATGATGTTGAGATGATTGACATTGAACAAGGGGAATTGCTCCAGGACCATGAAGCTGATAAAACAACACCCCGCGATGCGAAACTCGGTCGTAAACCTAACAAGAAGAAGAACAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTTGTGATAGATACATGCCGGCGTCTAAAAGAGAAAAAGACATACATGGTATACACAGCTATAGGTTGCCTTGGGGTTTCTGCATTAAGTGATCTCGTCAAAGAGGTGGATGCAATACAGGCTTGTGGAGGTCAGAAGACTTTTGACAGTAAGCTATTCCGGACAGGGGGTGGCGTATTGTGGAGCATCATTAAAGCTCGAGAACCAAATGCCTTCAAAGAGATTATGGAAAAAACAAAAGAATTTGAGAAGCAATTCAGGCAGCCAGGCATTAAGCAGAACCCCATTCAGAAAAAAGAGGATTCTTCTGAAGGGGTGCCCTTTACATTTGTTGGTGGGAATGAGGGAAATGTTTCTGACAATCCTTTTGGTGCATCACAAACGCAAGATCAACCTGTACCATCAGGTACTGAAGAGAAACATATCTCTGTTCTTGATAGATTAAGGCTACCTGTTTCCTACGACGATGACCTGCTTGGAGTAACTGCCGGTAATGTCGCAACCTAA 750 0.4213 METSSGDNILDAIYEEDYLDDDVEMIDIEQGELLQDHEADKTTPRDAKLGRKPNKKKNRKKKKKKKKKKKKKKKKKKKKKKFVIDTCRRLKEKKTYMVYTAIGCLGVSALSDLVKEVDAIQACGGQKTFDSKLFRTGGGVLWSIIKAREPNAFKEIMEKTKEFEKQFRQPGIKQNPIQKKEDSSEGVPFTFVGGNEGNVSDNPFGASQTQDQPVPSGTEEKHISVLDRLRLPVSYDDDLLGVTAGNVAT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3025 249 Gene3D - 73 170 IPR038092 -
Lja5g3025 249 MobiDBLite consensus disorder prediction 50 81 - -
Lja5g3025 249 MobiDBLite consensus disorder prediction 198 222 - -
Lja5g3025 249 MobiDBLite consensus disorder prediction 198 217 - -
Lja5g3025 249 Coils Coil 54 81 - -
Lja5g3025 249 MobiDBLite consensus disorder prediction 32 49 - -
Lja5g3025 249 MobiDBLite consensus disorder prediction 32 81 - -
Lja5g3025 249 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 5 240 IPR039047 GO:0006408
Lja5g3025 249 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 83 162 IPR019385 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3025 Lja-Chr5 59197187 59205599 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3025 K14291 - gmx:100793038 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3025 5 59197187 59205599 Lja1g4050 1 51282931 51287545 PCT