Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4050 ATGGAAGAGGGCGGAGATAACATTCTAGATGCCATATACGATGAGGATAATCTCTATGAGGATGTAGACATGATGGATGTTGAAGAAGGAGAGTTGGTGGAGTCTGATACTGAGAATGTTTTGGTGAAAAACAGTGCAGGGGATGGTACTGAAAATGTATCGGGGCAAAACAGTGCAGGAGATATCAATGGAGCAAATCGAGATCCGCCTAGCAAGAATTCCAAGCGTAGAGCGAACAAGAAGAAGAATAAGAGGAAGAGGAAGGGTTCTGGGTCTAAACCCTTGGACATTAACAGATTTGTGTTAGATACGTGTCGGCGCCTGAAGGAGAAGAAGTCGTACATGGTATACACTGCTGTGGGTTGCCTTGGGATCTCTGCATTAAGCGATATTGTCAATGAGGTCGATGCAATACAGGCTTGTGGAGGCCAGAAGACTGCTGATGGTAGACGATTCCGGACAGGGGGTGGCGTATTGTGGAGCATCATAAAAGTTCGGGAACCAAAAGCCTATAAAGAGATAATGAAAAAAGCAAAGGAGTTTGAGAAGCAATTCAGACAACCCAATGTTAAGCAACTACCCGTGCCAAAGAAAGAGGAATCTTCTCAAGGAGTTTCATTTGCTGGCAGTCCTAAAGAGGAATCTTCTCAAGTAGTGGCCTTTTCATTTGCTGGCCTGGATCTGGGCAATGATTCAGAAAATGCCTTTCCTGCAGTACAAATGCAAAACCAACCTGAGCCAGCTACTTCTAAAGAAAACCCTGTCTCTGTTCATGACAGGTTAAGGATACCTGTTTCGTATGACGATGATCTGCTTGGAGGGAGTTCAGTCAATGATGCAAGTGGCCTTCATCACTAG 858 0.4476 MEEGGDNILDAIYDEDNLYEDVDMMDVEEGELVESDTENVLVKNSAGDGTENVSGQNSAGDINGANRDPPSKNSKRRANKKKNKRKRKGSGSKPLDINRFVLDTCRRLKEKKSYMVYTAVGCLGISALSDIVNEVDAIQACGGQKTADGRRFRTGGGVLWSIIKVREPKAYKEIMKKAKEFEKQFRQPNVKQLPVPKKEESSQGVSFAGSPKEESSQVVAFSFAGLDLGNDSENAFPAVQMQNQPEPATSKENPVSVHDRLRIPVSYDDDLLGGSSVNDASGLHH* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4050 285 MobiDBLite consensus disorder prediction 38 69 - -
Lja1g4050 285 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 3 272 IPR039047 GO:0006408
Lja1g4050 285 MobiDBLite consensus disorder prediction 74 89 - -
Lja1g4050 285 Gene3D - 94 189 IPR038092 -
Lja1g4050 285 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 101 180 IPR019385 -
Lja1g4050 285 MobiDBLite consensus disorder prediction 28 95 - -
Lja1g4050 285 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4050 Lja-Chr1 51282931 51287545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4050 K14291 - gmx:100793038 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4050 1 51282931 51287545 Lja1g4050 1 51282931 51287545 ECH
Lja5g3025 5 59197187 59205599 Lja1g4050 1 51282931 51287545 PCT