Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2986 ATGCAAGGGCTTAGACGGTACTCAAATGACGTCGTTGAACTCGACCTTGGAGGAACCACCACAATCACAACCAACAACAACAACCTTAACAACAACAACTCTTCTTCTTCTTCATCTTCATCTCTATCAATCGATGTTGATGAATCAACGGAATCTCGAATCCAACGGCTGATATCGGAGCATCCTGTCATCATCTTCACCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCACCATCGGCGTCAACCCCACCGTCATCGAATTCGACGACGCCGAGATCGCCGCCTTACCACTCGACGTCGACGACGACCTCCGATCTCCCACCTCCGCCGCCGCTGCTTTGCTCCGCAGCCGCTCCCCCGCCGTGTTCATCGGCGGTGCCTGCGTCGGCGGGCTTGAGTCGCTTGTCGCGCTCCACGTCAGCGGCCACCTTGTCCCCAAACTCGTCCAAGTCGGCGCTCTCTGGGGGTATGAAAATTAA 495 0.5576 MQGLRRYSNDVVELDLGGTTTITTNNNNLNNNNSSSSSSSSLSIDVDESTESRIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIEFDDAEIAALPLDVDDDLRSPTSAAAALLRSRSPAVFIGGACVGGLESLVALHVSGHLVPKLVQVGALWGYEN* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2986 164 SUPERFAMILY Thioredoxin-like 51 160 IPR036249 -
Lja5g2986 164 Pfam Glutaredoxin 63 133 IPR002109 -
Lja5g2986 164 ProSiteProfiles Glutaredoxin domain profile. 51 160 - -
Lja5g2986 164 CDD GRX_GRXh_1_2_like 62 152 - -
Lja5g2986 164 Gene3D Glutaredoxin 43 160 - -
Lja5g2986 164 MobiDBLite consensus disorder prediction 23 44 - -
Lja5g2986 164 TIGRFAM GlrX-like_plant: glutaredoxin-like family 54 160 IPR011905 -
Lja5g2986 164 PANTHER GLUTAREDOXIN 28 160 IPR011905 -
Lja5g2986 164 PANTHER GLUTAREDOXIN-C6 28 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2986 Lja-Chr5 58599507 58600514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2986 54 160 Miscellaneous Gene Families AT4G15690 42.593 6.53e-23 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2986 - - lja:Lj5g3v0407150.1 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2986 5 58599507 58600514 Lja1g4035 1 51125765 51126750 PCT