Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4035 ATGGCCAGCTCTTCATCTTCCTCCTTATCGATGGAGCTGGACGAGTCGACGGAGAGCCGAATCGAACGGTTAATATCGGAGAACCCAGTGATCATCTTCACCAAATCCTCCTCCCCCTGCTGCATGTGCCATGTCATGAAGAACCTCCTCTCCACCATCGGCGTCCACCCCACTGTCATCAAATTGGACGACCATGAGATCACCGCCGCCCTCCACAACAACACCACCACCCCTGCCGCCTTCATCGGCGGCACCTGTATCGGCGGTTTAGAGTCCCTCGTGGCCCTCCACGTCACCGGCCTCCTCGTCCCCAAGCTCCATCAAGTCGGTGCTCTCTGCCACCTATGA 348 0.5805 MASSSSSSLSMELDESTESRIERLISENPVIIFTKSSSPCCMCHVMKNLLSTIGVHPTVIKLDDHEITAALHNNTTTPAAFIGGTCIGGLESLVALHVTGLLVPKLHQVGALCHL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4035 115 CDD GRX_GRXh_1_2_like 29 105 - -
Lja1g4035 115 TIGRFAM GlrX-like_plant: glutaredoxin-like family 21 112 IPR011905 -
Lja1g4035 115 Gene3D Glutaredoxin 11 114 - -
Lja1g4035 115 SUPERFAMILY Thioredoxin-like 18 112 IPR036249 -
Lja1g4035 115 Pfam Glutaredoxin 30 87 IPR002109 -
Lja1g4035 115 ProSiteProfiles Glutaredoxin domain profile. 18 113 - -
Lja1g4035 115 PANTHER GLUTAREDOXIN 4 113 IPR011905 -
Lja1g4035 115 PANTHER GLUTAREDOXIN-C6 4 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4035 Lja-Chr1 51125765 51126750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4035 21 112 Miscellaneous Gene Families AT4G15690 41.414 7.93e-20 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4035 - K03676 gmx:100791969 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2986 5 58599507 58600514 Lja1g4035 1 51125765 51126750 PCT