Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2849 ATGATGTCTCTGAAACCGTCTTCCAATTCGTCGGAGAATCTCATGCTTCCGGTATCGGACCCTCCGAGGGACCAAACCGGAGGAGGAGCAGCGCCGAAGGCCGACGATAAACTCTTCAAAGGTTCCGCCATGACCAAACGAGGTGCCTACGCTGCCATTTCTTACATGTCCTGCGCAGTTCTCTTGGTGATATTCAACAAGGCAGCTCTTTCATCTTATGACTTCCCATCTGCAAATGTCATCACACTTCTTCAGATGGTATGCTCGTGTTGTTTTCTCTATTTATTGAAGCGCTGGAGGATAATTTCTTTCGTGGCTGGCGAATCTTTACTTGTATCAGAGAACTCAACAAAATTTGTATCATTAAAGACATTGAAGCACACTTTTCCTCTAGCAGGAGCATATTTACTTTACATGCTAGTCACAATGGAGTCTGTTCGAGGAGTAAATGTTCCAATGTACACCACCCTTAGGAGGACCACAGTGGTCTTTACGATGCTTGTAGAGTTTGTTCTGGTGGGGCAGAGGTATACACCCTCTATCATTTTCAGTGTTTGCTTGATTGTCTTTGGTGCATTTGTTGCGGGAGCACGGGACTTCTCCTTTGATGCTTATGGCTACGCCGTTGTTTTTATGGCAAACATCACCACAGCAATATACCTTGCCACCATAGCCCGCATAGGAAAAACTAGTGGTCTTAATAGCTTTGGCCTTATGTGGTACAACGGTATCATGTGTGGCCCAGCATTACTCATCTGGACATTTATTCGGGGTGACTTGAAGATGGCAATCAATTTTCCTGATCTCTTCTCACCTGGTTTTATTGTTATTTTGCTATTTTCATGCACACTGGCATTCTTCTTGAATTACAGCATTTTTCTGAACACAACTCTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGGATCTATTTACCATTGGCCTTGGCTGGATAATTTTCGGTGGGCTACCATTTGATTTTTGGAATGTAATTGGGCAACTTCTTGGTTTTGCGGGATCTGGTTTATACGCCTATTATAAGCTCGTTGGCAAGTAA 1065 0.4347 MMSLKPSSNSSENLMLPVSDPPRDQTGGGAAPKADDKLFKGSAMTKRGAYAAISYMSCAVLLVIFNKAALSSYDFPSANVITLLQMVCSCCFLYLLKRWRIISFVAGESLLVSENSTKFVSLKTLKHTFPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSIIFSVCLIVFGAFVAGARDFSFDAYGYAVVFMANITTAIYLATIARIGKTSGLNSFGLMWYNGIMCGPALLIWTFIRGDLKMAINFPDLFSPGFIVILLFSCTLAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIIFGGLPFDFWNVIGQLLGFAGSGLYAYYKLVGK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2849 354 MobiDBLite consensus disorder prediction 1 16 - -
Lja5g2849 354 Pfam Triose-phosphate Transporter family 58 346 IPR004853 -
Lja5g2849 354 PANTHER SOLUTE CARRIER FAMILY 35 16 354 - -
Lja5g2849 354 PANTHER BNAA08G30680D PROTEIN 16 354 - -
Lja5g2849 354 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2849 Lja-Chr5 56065648 56072504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2849 47 350 Organic Solute Cotransporters AT1G77610 23.301 3.65e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2849 K15281 - gmx:100819763 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2849 5 56065648 56072504 Lja5g2849 5 56065648 56072504 ECH
Lja5g2849 5 56065648 56072504 Lja1g3888 1 49029044 49034131 PCT