Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2832 ATGAAGGGAAGGTTCATGTTTCTGTTGGTGCTCCTCTGTGCATCTTTTCATGTCTCCCTCTCCTTTAAGGACGGACTGGTGGCAAATGGAGACTTTGAGCTTGGGCCAAAGCCATCGGACTTGAAAGGCACGGTGGTGATCGGCGGGAAGAGCGCCATACCGGAGTGGGAGATCTCCGGCTTCGTTGAATACATAAAATCAGGCCAAAAACAAGGTGACATGCTACTGGTAGTTCCAGAGGGTGCTTATGCTGTGAGGCTGGGGAACGAGGCTTCCATTAAACAAAGAATAAAGGTGATTAAGGGAATGTACTACTCAATCACACTTTCGGTGGCTCGCACGTGCGCGCAGGAGGAGCGAATCAATGTGTCTGTGGCTCCAGACTTTGGAGTGATACCGATTCAAACATTGTACACGAGCAGTGGTTGGGATTCAATTGCTTATGGATTCAAAGCAGAGTTTGATGTGGTGGAGATGGTTGTTCATAACCCTGGTGTGGAAGAGGATCCAGCTTGTGGCCCCTTAGTTGATTCTGTTGCCCTCAGAACTCTTTACCCTCCTAGGCCTACTAACAAGAACCTATTAAAGAATGGCGGTTTTGAAGAAGGACCATATGTGTTTCCCAACTCATCATGGGGAGTTCTCATCCCACCCATGTTAGAAGACGACCACTCTCCCTTACCAGGTTGGATGGTGGAGTCCCTCAAGGCAGTGAAATACATAGACTCGCCCCATTTCTCAGTCCCAGAAGGGACTCGAGCCGTGGAGCTAGTAGCCGGAAAAGAAAGCGCCATCGCGCAAGTCGCGAGAACCGTTCCCGGCAAAACCTACGTCCTCTCGTTCTCCGTGGGAGACGCCAACAACTCTTGTGAAGGCTCCATGATCGTGGAAGCCTTCGCCGGCAGGGACACGGTGAAAGTGCCTTACCAGTCCAAAGGCAAAGGCGGGTTCAAGCGCGCGGCGCTTAGGTTTGTGGCGGTTTCGCCAAGAACACGAGTGATGTTCCTCAGCACTTTTTATACCATGAGGAGTGATGACTTCTCTTCGCTGTGTGGACCTGTGGTTGATGATGTCAAGTTACTGAGCCTGCGTAAACCATAA 1101 0.5077 MKGRFMFLLVLLCASFHVSLSFKDGLVANGDFELGPKPSDLKGTVVIGGKSAIPEWEISGFVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQRIKVIKGMYYSITLSVARTCAQEERINVSVAPDFGVIPIQTLYTSSGWDSIAYGFKAEFDVVEMVVHNPGVEEDPACGPLVDSVALRTLYPPRPTNKNLLKNGGFEEGPYVFPNSSWGVLIPPMLEDDHSPLPGWMVESLKAVKYIDSPHFSVPEGTRAVELVAGKESAIAQVARTVPGKTYVLSFSVGDANNSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRAALRFVAVSPRTRVMFLSTFYTMRSDDFSSLCGPVVDDVKLLSLRKP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2832 366 Gene3D - 189 361 - -
Lja5g2832 366 Pfam Protein of unknown function (DUF642) 193 360 IPR006946 -
Lja5g2832 366 Pfam Protein of unknown function (DUF642) 25 182 IPR006946 -
Lja5g2832 366 PANTHER PLANT/F18G18-200 PROTEIN 6 366 - -
Lja5g2832 366 PANTHER OS02G0527500 PROTEIN-RELATED 6 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2832 Lja-Chr5 55820940 55827494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2832 - - gmx:100776765 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2832 5 55820940 55827494 Lja5g2832 5 55820940 55827494 ECH
Lja1g3851 1 48658035 48660403 Lja5g2832 5 55820940 55827494 ECH