Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2823 ATGGAGAGCAGTGACAGCATAACCAGAGTTGAAAGCCAAAGAAATAGTGGTTCTGGAATCTGGAGGAGGAACACAAGCATGGACATTTTCTCAACATCAGAACGTGAAGATGATGAAGAAGCTCTGAAATGGGCTGCAATAGAGAGGCTTCCAACGTATCTACGCATAAGGAGAAGCATACTCAACAATCCAGAAGGGAAAGGGATAGAGGTTGATATTAAGCAACTAGGAATCACGGAGAGGAAGATTCTGCTAGAAAGGCTCGTGAAAATTGCAGAAGATGATAATGAAAAGTTCTTGTTGAAACTCAGGGAACGCATAGACAGAGTTGGACTTGCTATTCCAACGGTTGAAGTTCGGTTTGAGCATTTCAGTGTGGAGGCACAAGTTTATGTTGGAGGAAGAGCATTACCTTCATTGTTCAATTTCTTTATTAATGTGCTAGAGGGTTTCTTAAATTATCTTCATATAATTCCAAGTCCAAAGAAACAGTTGCGTATCCTTCAGAATGTTAGTGGAATCATAAAGCCTAGAAGAATGACATTGCTTTTGGGGCCACCAGGCTCAGGAAAGACCACTTTGCTGTTGGCGTTGGCTGGAAAACTTGAGAAAGATTTGAAACATTCTGGGAGAGTAACATACAATGGGCATGAGCTGGATGAGTTTGTGCCACAAAGGACATCAGCTTATATAAGTCAACATGATAATCACATTGGAGAAATGACTGTCAGAGAAACACTAGCTTTCTCAGCTAGATGTCAAGGGGTTGGACAGAACTATGAGATGTTGACTGAACTACTAAGAAGAGAGAAGCAGGCACAGATTAAACCAGATGCTGATGTTGACGCCTTTATGAAGGCAGCAGTACTAGAAGGACAAAAGACAAGCGTGGTCACGGACTATATTCTCAAGATTTTGGGACTTGAAGTTTGTGCTGACATTATGGTAGGGGATGGAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAACGAGTCACAACAGGGGAGATGCTGGTTGGACCTGTAAGGGTGTTGTTTATGGATGAGATATCAACTGGTTTGGACAGTTCCACAACTTTTCAAATAATCAGCTCAATCCGGCAATCGATTCATATTCTCAATGGAACTGCACTTGTCTCCCTGCTACAGCCAGCATCAGAAACATATGAACTGTTTGATGATATAATACTTCTAACAGATGGACAAATAGTGTACCAAGGACCAAGAGAAAATGTACTTGAGTTTTTTGAATCAATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGTTTCTGACTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATACTGGGCGCGTAAAGATGAACCTTATAGCTTTGTTACTGTCAAAGATTTTGCTGAAGCCTTCCAGTTATTTCACGTAGGTCGGAAACTCGGAGACGAGTTAGGCAATCCTTTTGACAAGTCTAAATGTCATCCAAATGCCTTAACCAAAAAGAAGTTTGGTGTTAACCGGAAGGAGCTGCTAAGGGCTTGTGCTAGCAGAGAATTTTTGCTTATGAAGAGAAACTCGTTTGTTTACATATTCAAAGTCACCCAACTTATTTATTTAGCTGTCATTACAACAACATTATTTCTAAGAACTAAGATGCATCGAGATACTGTGGAGGATGGAGGAACTTACATGGGTGCTCTTTTCTTCACAATCGTCGTTGCAATGTTCAATGGAATATCAGAGATAAATATGGCCATTATGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTCCTTTTCTACCCTTCATGGGCTTATTCTCTTCCACCATGGATTCTCAAAATACCAATAACCCTCGTAGAAGCTGCAATCTGGGAATGCATCTCTTACTATGCCATTGGTTACGATCCAAGTTTTGTTAGGCTTTTAAAACAATACTTGATAATCCTGTGCATTAACCAGATGGCATCTTCACTTTTTCGGTTGATGGCAGCATTAGGAAGGGATATTGTAGTTGCAAACACTGTTGGCTCATTTGCACTACTAGTAGTTCTTGTTTTGGGAGGATTTGTGATTTCACGAGAGGATGTGCCCAAATGGTTTATATGGGGTTACTGGTCCTCACCACTGATGTATGGACAGAATGCTATAGCTGTTAATGAATTTCTTGGGCATAGTTGGAGAAAGGTTACTTCTAATTCCAATGAAACACTGGGAGTTTTGGTACTGAAAACTCGTGGATTGTTCACAGAAGCTTATTGGTATTGGATTGGAGTAGGAGCATTGATTGGTTATATTTTTCTATTTAATTCTCTCATCATATTGGCTTTGCAATATCTGAGTCCATTCAGAAATAATCAGGCAGGGTTATCCCAGGAGAAATTGCTTGAGAGAAATGCTTCACCAGATGAAGAGTTCATTGAGTTACCAAAAAGAAAGAGCTCTTCTGAAACAAAGATGGAAGACGAAGCAAGTATATCATCCAGGTCGTTTTCTGGAAGAGACAATGTTAAAGCTAAAAGTGGAAGGAGGGGCATGGTTCTTCCTTTTCAACCTCTCTCTCTCACTTTTGATGAGATATCATATTCTGTAGACATGCCGCAGGAAATGAAAAATCAAGGAGTTTTCGAGGACCGTCTTAAACTTTTGAAGGGTGTCAGTGGAGCCTTTAGGCCTGGAGTACTAACAGCTCTAATGGGTGTAAGTGGTGCTGGCAAGACTACTCTGATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATATTGAAGGAGCCATCACAATATCTGGGTACCCAAAGAATCAACAAACATTTGCTCGCATAGCAGGTTATTGTGAACAATTTGATATCCACTCACCTAATGTTACAGTTTATGAATCTTTGCTATATTCTGCCTGGCTTCGATTACCACGTGAAGTGGATACTGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTGGAGCTAAATTCATTAAGAGAAGCACTTGTTGGATTGCCCGGTGAGACTGGACTTTCAACTGAGCAGCGCAAGAGACTTACAATTGCAGTTGAACTTGTAGCCAATCCAGCAATAATATTCATGGATGAGCCAACCTCTGGTCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACTGTGAGGAACACCGTGGACACAGGACGCACTGTGGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCATTCGATGAGCTGCTACTTCTGAAATTGGGAGGAGAGCCAATATATGCTGGTCCATTAGGCCGCCACTGTTACCAAATGATTCAGTACTTTGAGGATATTCAAGGAGTTCCTAAGATTAGAGATGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGCAACTGAAGCAAGTCTGAAGGTCAATTTCACAAATGTGTACAAAAACTCAGAACTACACCGGAGAAACAAACAACTGATCCAGGAGCTTAATATTCCTCCTGAAGGTTCAAAGGATCTATACTTTGATACTCAGTATTCACAGACATTAGTGGCACAATTTAAAGCTTGCATATGGAAACAACACTTATCTTATTGGCGGAACACATCATATACTGCAGTTAGACTCCTATTTACAACACTAATAGCTTTAATGTTTGGGGTCTTATTTTGGGAGATTGGCTCAAAAAGGGGAAATGAGCAAGATCTTTTCAATGCAATGGGTTCAATGTATGCTGCAGTTACCTTCATTGGAGTTCAAAATGGTGCCTCAGTGCAGCCAATCATAGCAGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCTTTTGCACAGGTGGCTATCGAGCTTCCCCACATCTTGGCTCAAACACTTGTATATGGAATTGTAGTTTATGCCATGATGGGATTTGATTGGTCAACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTGTACTTCACCTTTTATGGTATGATGACCATGGCCATTAGTCCTAACCCACACATTGCCGGCATATTGTCATCGGCATTCTACGCAATATGGAGCCTTTTCTCAGGCTTCATCATTCCCTTATCTAGAATACCCATATGGTGGAAGTGGTACTATTGGATTTGCCCTGTTGCATGGACCATAAATGGATTGGTGACTTCCCAATATGGAGATGACATGGGAAAACTTGAAAATGGTCAACGTATTGAAGAATTTGTGGAGAGTTACTTCGGATTTAAACATGATTTTCTGGGAGTGGTTGCAGTTGTGGTGGCTGGTTTTTCAGTGTTGTTTGCACTCATCTTCACATTTGGGATCAAATTTTCAAAATGGCTAAGTAAAACTAATTTGAAACCGGGTATTAGCATTCCAGTGCACATTAACATCAGCCCCTTTCTTCCCTCTTGTCCTCTCGCCGGCTCGCCGGAGAGTCTTCCACCGCACCGATTCCATCAAGCACCAAGGGACAAAAGATACCGAGAAGGTTAA 4485 0.4098 MESSDSITRVESQRNSGSGIWRRNTSMDIFSTSEREDDEEALKWAAIERLPTYLRIRRSILNNPEGKGIEVDIKQLGITERKILLERLVKIAEDDNEKFLLKLRERIDRVGLAIPTVEVRFEHFSVEAQVYVGGRALPSLFNFFINVLEGFLNYLHIIPSPKKQLRILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLEKDLKHSGRVTYNGHELDEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRREKQAQIKPDADVDAFMKAAVLEGQKTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPVRVLFMDEISTGLDSSTTFQIISSIRQSIHILNGTALVSLLQPASETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVSDFLQEVTSRKDQWQYWARKDEPYSFVTVKDFAEAFQLFHVGRKLGDELGNPFDKSKCHPNALTKKKFGVNRKELLRACASREFLLMKRNSFVYIFKVTQLIYLAVITTTLFLRTKMHRDTVEDGGTYMGALFFTIVVAMFNGISEINMAIMKLPVFYKQRDLLFYPSWAYSLPPWILKIPITLVEAAIWECISYYAIGYDPSFVRLLKQYLIILCINQMASSLFRLMAALGRDIVVANTVGSFALLVVLVLGGFVISREDVPKWFIWGYWSSPLMYGQNAIAVNEFLGHSWRKVTSNSNETLGVLVLKTRGLFTEAYWYWIGVGALIGYIFLFNSLIILALQYLSPFRNNQAGLSQEKLLERNASPDEEFIELPKRKSSSETKMEDEASISSRSFSGRDNVKAKSGRRGMVLPFQPLSLTFDEISYSVDMPQEMKNQGVFEDRLKLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGAITISGYPKNQQTFARIAGYCEQFDIHSPNVTVYESLLYSAWLRLPREVDTATRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPAIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEPIYAGPLGRHCYQMIQYFEDIQGVPKIRDGYNPATWMLEVTSAATEASLKVNFTNVYKNSELHRRNKQLIQELNIPPEGSKDLYFDTQYSQTLVAQFKACIWKQHLSYWRNTSYTAVRLLFTTLIALMFGVLFWEIGSKRGNEQDLFNAMGSMYAAVTFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYAFAQVAIELPHILAQTLVYGIVVYAMMGFDWSTSKFLWYLFFMYFTFLYFTFYGMMTMAISPNPHIAGILSSAFYAIWSLFSGFIIPLSRIPIWWKWYYWICPVAWTINGLVTSQYGDDMGKLENGQRIEEFVESYFGFKHDFLGVVAVVVAGFSVLFALIFTFGIKFSKWLSKTNLKPGISIPVHINISPFLPSCPLAGSPESLPPHRFHQAPRDKRYREG* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2823 1494 Gene3D - 863 1095 IPR027417 -
Lja5g2823 1494 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
Lja5g2823 1494 Pfam ABC-transporter N-terminal 92 143 IPR029481 -
Lja5g2823 1494 Pfam ABC-2 type transporter 1175 1387 IPR013525 GO:0016020|GO:0140359
Lja5g2823 1494 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Lja5g2823 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Lja5g2823 1494 Pfam Plant PDR ABC transporter associated 721 782 IPR013581 -
Lja5g2823 1494 MobiDBLite consensus disorder prediction 803 831 - -
Lja5g2823 1494 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Lja5g2823 1494 Pfam ABC-2 type transporter 383 433 IPR043926 GO:0140359
Lja5g2823 1494 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 10 1440 - -
Lja5g2823 1494 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1440 - -
Lja5g2823 1494 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Lja5g2823 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1101 IPR003439 GO:0005524
Lja5g2823 1494 MobiDBLite consensus disorder prediction 1475 1494 - -
Lja5g2823 1494 CDD ABCG_PDR_domain1 150 407 IPR034001 -
Lja5g2823 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 1079 IPR027417 -
Lja5g2823 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 425 IPR027417 -
Lja5g2823 1494 MobiDBLite consensus disorder prediction 803 818 - -
Lja5g2823 1494 Gene3D - 155 459 IPR027417 -
Lja5g2823 1494 SMART AAA_5 886 1078 IPR003593 -
Lja5g2823 1494 SMART AAA_5 177 402 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2823 Lja-Chr5 55686137 55696277 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2823 K08711 - gmx:100810505 2488.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2823 5 55686137 55696277 Lja1g3843 1 48579927 48587356 PCT