Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2819 ATGGCTACAAGTACTCTCTCAGAAGCCTATAGAGACAACCCTATCCCCCTCAATCATATTATCCCCTTGGACTTTTCATCACTTAGGACCTTACCTGATTCTCATGCATGGCCTCATCAACCTAGTGATAATGATCATGATTCCATACCCATCATAGACCTCATGGATCCAAATGCCATGGATCTCATAGGCCTTGCATGTGAGAGTTGGGGTGCTTTCCAATTGAAGAACCATGGCATACCCTTGAGAATAATTGAGGAGGTTGAAGCAGAGGTAAAGAGGCTCTTTGATCTCCCCTCAGACATGAAGTTGAAGGCCCTCAGAACCTCTGCTGGTACCACTGGTTATGGCAGGGCACGGATATCACCATTCTTCCCCAAGTACATGTGGCATGAAGGGTTCACAATCGTGGGATTTTCTGATGATGCCAAAAAGATCTGGCCTAATGACTATGCACGGTTTTGTGATATAATGGAGAACTACCAGAAACAAATGAAGGCCCTAGCTGAGAAACTAACACACATGATACTCAACTTGTTGGGAGTTTCTGAGGATGACAAGAAGTGGATTGGTTCAAGCAACCATGTTGGTGCGCTTCAGCTTAATTTCTACCCATGTTGTCCCGAGCCGAACCAAGCCATGGGTCTCGCTCCGCACACGGACACTTCCTTTCTAACAATCATCAACCAGAGCCAAACTAATGGCCTCCAAATCTTCAAGGAAGGTATTGGTTGGGTCCCTGTGCGCCCACTTCTGGACACCCTTATCGTTCACACGGGTGACATTCTCCACATCCTCTCCAACGCGAGGTTCCATTGTGCCTTGCACCGCGTCACGGTGAACGGTGCAAGACACAGGTACTCCACGGCTTATTTCTATGGACCCCCGTTGGATCATGTGGTTTCCCCTTTGGTTCTCAACTCCGTGGCATGTTTTCGTGCTTTGACTGTGAAGGAGTATATTGGCATTAAAGAGAAGAATCTCAGGGGAGCATTGTCTTTGATTAGTGTATTTAAAACTGAATAA 1026 0.4669 MATSTLSEAYRDNPIPLNHIIPLDFSSLRTLPDSHAWPHQPSDNDHDSIPIIDLMDPNAMDLIGLACESWGAFQLKNHGIPLRIIEEVEAEVKRLFDLPSDMKLKALRTSAGTTGYGRARISPFFPKYMWHEGFTIVGFSDDAKKIWPNDYARFCDIMENYQKQMKALAEKLTHMILNLLGVSEDDKKWIGSSNHVGALQLNFYPCCPEPNQAMGLAPHTDTSFLTIINQSQTNGLQIFKEGIGWVPVRPLLDTLIVHTGDILHILSNARFHCALHRVTVNGARHRYSTAYFYGPPLDHVVSPLVLNSVACFRALTVKEYIGIKEKNLRGALSLISVFKTE* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2819 341 Coils Coil 158 178 - -
Lja5g2819 341 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 331 - -
Lja5g2819 341 PRINTS Isopenicillin N synthase signature 219 240 - -
Lja5g2819 341 PRINTS Isopenicillin N synthase signature 255 281 - -
Lja5g2819 341 PRINTS Isopenicillin N synthase signature 63 80 - -
Lja5g2819 341 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 13 331 - -
Lja5g2819 341 SUPERFAMILY Clavaminate synthase-like 19 327 - -
Lja5g2819 341 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 139 IPR026992 -
Lja5g2819 341 Gene3D - 19 327 IPR027443 -
Lja5g2819 341 Pfam 2OG-Fe(II) oxygenase superfamily 199 295 IPR044861 -
Lja5g2819 341 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 295 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2819 Lja-Chr5 55534428 55538343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2819 49 331 Glycosyltransferase AT5G59530 29.355 1.66e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2819 K04124 - gmx:100808546 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3836 1 48456403 48458690 Lja5g2819 5 55534428 55538343 PCT