LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja5g2812	ATGACGAGCCTGAAAAACCACTCCACGTTTTTCGGGACTAAGCTTCATGCTTCTTTCGAAACCAACAGGAACAACCCTTTTCATTTCCAGAAAAGAAGGTTGCAAAAAAAGGGTCTTTTTTGCAGTTGCAGCACAAAACGTTGTCGTCTGGTAAGCCAAGCGTTACGGTTTTCGCATTTTTCTGGCCAAAATGTAGAATTCTTGAGGAAAGACCAAATTTTGAGAAGTGGGTCGAGGTTAAAATGTGCAAAGGAAAAGGAACCCATTTTTACAAGAGAGGCTTTGGTTAGTTATTTGACCCCTTTGTGGAAAGAGGGTCTTCTTTTGATAAGGGCTTCTGTTTACACTGCTGTTTTGTGTGGAGTTTGCATGTTAGTGTGGTATGGTCAGAATAAGGTTAAGGGTTATGTTGAAACCAATTTGCTGCCTTCTGCTTGTGAAGCAATTAGTGAGTATATTCAGCGTGACCTTGTGTTTGGTAAGGTTCGACGAGTCTCGCCGTTGAGTATTACGTTGGAGTCCTGCTCGTTTGGGCCGCATAAGGAGGAGTTTTCGTGTGGGGAGGTTCCTACGGTTAAGCTTCGTCTTAGGCCTTTCGCGAGTTTGAGGACGGGGAAGTTGGTGATTGATGCGGTTTTGTCGAATCCGAGTGTTTTGGTTGTGCAGAAGAAGGATTATACTTGGTTGGGGATACCGTTCAATGAAGGCGGCAGAGAGAGGCACTATTCGACTGAGGAAGGGATAGATCATCGTACTAGAACGCGGAGGCTTGCGCGAGAGGAAGGTGTTGGGCGGTGGGAAAGAGCAAGGGATGATGAAGCTCGGGAAGCTGCTGAGGCGGGTTTCTTTGTTTCTGAGCGGAGTTGTTGTCCATCCGGAGGTGAGGGTTTAAAGGAGGTCGAAAGTTGTTCAGCCGAGTTAACTGATACCACACCCTTTTTCTGCACGAATGGTGGGAAGCATGATCATCGGTTTATGGACACAGGTGTTGATTATGATGTGAAACATTCCTATTTGGAAAAATCATTTGGAGTGAGATTTCCTGTTTCTGGACTTCGATTTTGGTCCAGAGTAATATCAGGGCGTAAGAGACACAAATTTAAGAGGAAAGCTAATGGGAGTGACATCTATGCATCTGGTGTTGCTATGAAAAAAAGAATATTTGATCGTAGTGCTTCAGCAGCTCGCACATACTTTGATGATCAATCAAATGGAAAGTTTGGAGAGCCTGCATCACCTTCTCAATGTTTTCATTTTATGAATCATGACATGCATGTGGTGAAAAGTGAGTTTGACAAAAATGCAAATTCTGTTACGGTTGGTGATGAAAATAGAAGTGATGATAACCAAATTGCTGCACAAATTAGAGATATGAGAATCTGGCCCTCCTTGGTAAATGAAAATGACAGAGCTCATTCAGGTTATGGCAAATTTGTCTCTGATCCTACTTTACAGACAAGAGAGAGTGAACTTGAAAATTTGCAATCCAGTGAGGAAGTTGCAGAACCTGCCAATGGTAATAGTAGTACAGAGAAAAATGAAGAGTTGGTACCTCCTGTTGAAGACAATCATTTTGAGGATGAAGATTTTTCTGGGGGCCAACCAGGTTTAACATCTGAAGATTTTGATTTTGTGAAGCCTAAGCCTCGATTGGCAGCTGATTTTAAAATTCCATTTGAGCCCTTGATTGAGAAATTTGGCTTAACCTCCTCTTTAAGAAATTTTGAGCAGCTGATATCTTCCTTTCTTTCTGGTCCCATTGAAAAGTTGAAGTTGGATGTGGGTCTGAAAGTTGAAGATCTTGTAGCAGAACATGTTGATGGGGTTGATTTTGTGCAGTCTGAAGGCATTAATAAGATGCTTCCTGTAACATTGGATTCTGTTCATTTCAGAGGTGCAACGGTGATGCTACTTGCATATGGTGACAGGGAAGTTAGGGAGATGGAGAATGTAAATGGGCATGTAAAGTTCCAAAATCACTATAGTCGCATACATGTGCATCTTAGTGGAAATTGTAATACTTGGAGATCGGATATTATATCTGAAGATGGGGGCTGGTTGTCTGCTAATATTTTTGTTGATACTCTTGAGCAGAATTGGCATGCTAATTTAAAAGTTGACAATCTTTTTGTCCCGCTGTTTGAAAGGATCTTAGAAATTCCAATTACGTGGTCTAAAGGGAGGGCTAGTGGCGAGGTCCACTTGTGCATGTCAAAGGGGGAAACTTTTCCAAATTTTCATGGACAGCTTGATGTGACAGGGTTGGATTTTCAACTATTGGATGCGCCATCATGTTTTTCTAAAATATCAGTGAGTTTATGTTTTCGTGGGCAAAGAATATTTTTACACAATGCAAATGGCTGGTTTGGCAGTGTTCCTCTTGAAGCATCAGGAGACTTCGGCATTAATCCTGAAGAAGGAGAGTTTCATCTTATGTGTCAGGTTCCAGCGGTCGAAGTGAATGCTTTGATGAGAACTTTTAAGATGAGACCGCTCTTATTTCCGCTAGCTGGATCAGTAACTGCTCTATTCAATTGTCAAGGCCCGCTTGATGCTCCTGTCTTTGTAGGAACTGGAATGGTTTCTAGGACGTTCTCTTATTTACCAATTGACACCGCTGCATCTGTATCATCTGAAGCAGTTTCTGCAAGTAAGGAGGCTGGTGCGCTGGCAGCATTTGATCGCGTTCCATTTTCTTATGTATCTGCCAATTTCACTTTCAACACTGATAACTGTGTTGCTGATTTATATGGAATTAGGGCGTGTCTTGTAGATGGTGGTGAAATTCGAGGGGCTGGGAATGCATGGATATGCCCCGAGGGGGAGGAGGATGAGACAGCAATAGACGTGAATTTATCTGGAAGTTTGGCCATCGATAACATCTTGCCTCGTTACATTCCAAGTAATTTTCATCAGATGCCACTCAAGTTAGGGGTATTAAATGGAGAAACGAAACTTTCAGGATCTCTTCTAAAACCAAGGTTTGATATAAAGTGGACTGCACCTATAGCAGAAGGATCTTTCAATGATGCTCGAGGAGATATCATAATCTCACATGATTTTATTACTGTGAATTCTTCCTCAGCTGCATTTGATCTGTATACGAGGATTCAAACATCTTATCCTGGTGATTTCTATCTTAAAAATGAAGAGTTTTATGCACCAAGAGCCATTCCATTTACAATTGATGGAGTTGAGTTGGATTTACGTATGCGTGGGTTTGAATTCTTCAGTTTGGTTTCTGCGTATACTATGGATTCTCCAAAGCCTTTGCATTTGAAAGCAACTGGAAGGATCAAGTTTCAGGGAAAGGTTTTAAAGCCTAGTGGCAGTATCAGTGAACAAAATTTTGAGATGAATAGGCAGCATGTGCAAATGTTGGAGAAAGGAATCACAGATAGTCTTGATGGAGAGATTTCAATCTCTGGTCTGAAATTGAACCAATTGATGCTTGCACCCCAGTTGTCTGGGTTGTTGAGAATTTCTCCTGAGCGTATCAAGCTGGATGCTTCGGGTAGGCCTGATGAAAGTCTTGTAGTGGAGTTTGTTGGGCCACTGCAACCCAGTAATGAAGATGGTCTGCAAACTGGAAAACTGTTGTCCATTTCCCTACAGAAAGGGCAATTGAGGGCTAACATTTGTTTTCAACCATTTCATTCTGCTAACTTGGAGGTGCGGCATTTTCCACTTGATGAATTGGAGCTTGCTTCTCTTCGGGGGACAATACAGAGAGCAGAATTCCAACTTAATCTTCACAAAAGAAGAGGACAAGGTGTCCTATCTGTACTTCGGCCAAAATTCAGTGGTGTGCTTGGTGAAGCCCTAGATGTTGCAGCTAGGTGGAGTGGAGATGTTATCACTATTGAAAAAACTGTGTTGCAACAAAACTACAGTTGCTATGAACTTCAAGGTGAATACATTTTGCCAGGCACCCGAGATCGTAATCCTGTTGAAAAAGAAGGAGGTGGCCTTATGAAAAGGCTAATGTCTGGGCATATTGGCAGTGCTATTTCCTCAATGGGCAGGTGGAGAATGAAACTTGAAGTTTGTAAAGCCGACGTTGCTGAGATGCTTCCTCTTGCAAGGCTTCTTTCCAGAAGCATGGATCCTGCTGTTCATTCAAGATCTAAGGATTTCTTCGTTCAAAGTTTACACTCAGTGGGATTATATACTGAAAGCCTTCAACAACTGCTTGAGAAAATGAGAGGGCTTCATGCTCCATCAGATGATGTTGTTCTTGAAGATGTAACGCTGCCTGGTTTATCTGAACTGAAAGGTCACTGGCGTGGATCTCTTGATGCTAGCGGTGGAGGAAACGGGGACACCCTGGCAGAATTTGACTTTCATGGGGAGGACTGGGAGTGGGGAGACTACAAAACTCAGCGTGTGGTGGCAGTGGGTGCTTACAGTAATGATGATGGGTTGCACCTGGAGAAGATTTTTATCCAGAAGGATAATGCGACCATCCATGCAGATGGAACATTGTTAGGACCTAAAACAAACCTCCACTTTGCTGTCTTAAATTTTCCCATCAGTCTGGTCCCCACTGTAGTTCAGGTCATTGAATCTACCGCAACAGATATTGTTCATTCTCTGCGGCAATTGTTAGCGCCCATTAAGGGTATATTGCATATGGAAGGAGATCTCAGAGGAAGTTTAGCAAAACCAGAATGTGATGTGCAAGTAAGGCTCTTGGATGGTGCCATTGGTGGTATTGATCTTGGGCGAGCAGAAGTTGTTGCTTCTCTAACCTCAACCAGTCGATTTCTATTCAATGCAAAACTTGAACCTATAATCCAAAATGGCCATGTACTCATTCAAGGTAGCATTCCTGTTGCTTTTGTGCAAAATAACACCTTACAAGAAGATGCAGAATTGGATACGAGTCGAACTACCTGGGTACCTGATTGGGTGAAGGAGAAGAATAGAGGGACTGCTGATGATGCAAGTGATAAAAAAGTTTCTAGAGATAGAAATGAAGAAAGTTGGAATACTCAATTAGCAGAAAGTCTTAAAGGTTTAAATTGGCAAATTTTAGATGTTGGAGAGGTCAGGATTGATGCTGACATAAAAGATGGGGGAATGACATTGGTAACAGCCTTATCTCCTCATGCCAATTGGCTTCAGGGCAATGCTGATGTCATGCTTGAGGTCAGAGGCACAGTTGATCAACCGGTACTTAATGGACACGCATCTTTCCACCGGGCATCTATTTCTTCACCAGTGCTCCGAAAGCCACTAACCAACTTTGGGGGAACTGTTCATGTGAAATCAAACAGGTTGTCCATCACATCACTAGAAAGTAGGGTAAGCAGAAAAGGAAAGCTCCTTGTGAAAGGGAACCTACCACTCAGAACTAGTGAAGCAGCCCCTGATGACAAGATTGAATTGAAGTGTGAAGTTTTGGAAGTACGGGCCCAAAAGATATTAAGTGGTCAGGTTGATTCTCAGTTGCAAATAACTGGTTCGATATTGCAACCAAACATATCTGGGAATATCAAACTAAGTCACGGAGAAGCATATTTGCCACACGATCGAGGTGGTGCTCATGCTTCTAATAGATTCCCATCAAATCAATCAGTGCTTCCTGCTGGTGGCATTAGTAAAATGTTTGCATCAAGATATGTTTCACGATTTTTCAGCTCAGAATCTGCTTCTTCAAGGGCCACAAATTCTCAATCCTCTGGCTCTGTTAATAATGCAACTCAGGTTGAAAAGCAGACAGAGGATGTGCAGATTAAACCAGATCTAGAAATCTGCCTTAGTGATTTGAAGCTTGTGCTTGGACCAGAGTTGAAGATAGTTTATCCTTTGATCCTTAATTTTGCTGTGAGTGGAGAGCTTGAGTTGAATGGTCTTGCCCATCCCAAATGGATAAAACCTAGAGGCATACTGGCATTTGAAAATGGTGAAGTTGATTTAGTTGCAACCCAGGTTCGGTTAAAACGAGAGCATTTGAATATTGCAAAATTTGAGCCTGAGTATGGACTAGATCCAATGCTAGATTTGGTTTTGGTTGGATCTGAGTGGCAATTTAGAATTCAAGGTAGAGCTAGCAATTGGCAGGACAAACTTGTAGTGACCTCAACTCGTTCTGTGGAACAGGATGCCCTTTCGCCTACTGAGGCTGCCAGAAGATTTGAGAGTCAGTTGGCTGAATCCATTTTGGAAGGCAATGGGCAACTTGCATTTGAAAAACTTGCAACTGCAACTCTTGAAAAGTTGATGCCACGAATAGAAGGGAAGGGAGAGATTGGCCACGCAAGGTGGAGAGTCGTGTATGCACCTCAGATTCCTAGTTTGGTTTCTGTTGATCCTACGGCAGATCCTCTCAAGTCTCTAGCTAGTAATATATCGTTTGGTACAGAAGTTGAAGTCCAGCTTGGGAAACGACTTCAGGCCACAGTCGTGCGGCAAATGAAGGAATCCGAGATGGCAATGCAGTGGACCTTGAGCTATCTTCTTACAAGTCGTTTGCGGGTGCTCTTACAATCTGCTCCATCCAAACGCATTCTTTTTGAATATTCTGCTACATCCCAGGATTGA	6546	0.4259	MTSLKNHSTFFGTKLHASFETNRNNPFHFQKRRLQKKGLFCSCSTKRCRLVSQALRFSHFSGQNVEFLRKDQILRSGSRLKCAKEKEPIFTREALVSYLTPLWKEGLLLIRASVYTAVLCGVCMLVWYGQNKVKGYVETNLLPSACEAISEYIQRDLVFGKVRRVSPLSITLESCSFGPHKEEFSCGEVPTVKLRLRPFASLRTGKLVIDAVLSNPSVLVVQKKDYTWLGIPFNEGGRERHYSTEEGIDHRTRTRRLAREEGVGRWERARDDEAREAAEAGFFVSERSCCPSGGEGLKEVESCSAELTDTTPFFCTNGGKHDHRFMDTGVDYDVKHSYLEKSFGVRFPVSGLRFWSRVISGRKRHKFKRKANGSDIYASGVAMKKRIFDRSASAARTYFDDQSNGKFGEPASPSQCFHFMNHDMHVVKSEFDKNANSVTVGDENRSDDNQIAAQIRDMRIWPSLVNENDRAHSGYGKFVSDPTLQTRESELENLQSSEEVAEPANGNSSTEKNEELVPPVEDNHFEDEDFSGGQPGLTSEDFDFVKPKPRLAADFKIPFEPLIEKFGLTSSLRNFEQLISSFLSGPIEKLKLDVGLKVEDLVAEHVDGVDFVQSEGINKMLPVTLDSVHFRGATVMLLAYGDREVREMENVNGHVKFQNHYSRIHVHLSGNCNTWRSDIISEDGGWLSANIFVDTLEQNWHANLKVDNLFVPLFERILEIPITWSKGRASGEVHLCMSKGETFPNFHGQLDVTGLDFQLLDAPSCFSKISVSLCFRGQRIFLHNANGWFGSVPLEASGDFGINPEEGEFHLMCQVPAVEVNALMRTFKMRPLLFPLAGSVTALFNCQGPLDAPVFVGTGMVSRTFSYLPIDTAASVSSEAVSASKEAGALAAFDRVPFSYVSANFTFNTDNCVADLYGIRACLVDGGEIRGAGNAWICPEGEEDETAIDVNLSGSLAIDNILPRYIPSNFHQMPLKLGVLNGETKLSGSLLKPRFDIKWTAPIAEGSFNDARGDIIISHDFITVNSSSAAFDLYTRIQTSYPGDFYLKNEEFYAPRAIPFTIDGVELDLRMRGFEFFSLVSAYTMDSPKPLHLKATGRIKFQGKVLKPSGSISEQNFEMNRQHVQMLEKGITDSLDGEISISGLKLNQLMLAPQLSGLLRISPERIKLDASGRPDESLVVEFVGPLQPSNEDGLQTGKLLSISLQKGQLRANICFQPFHSANLEVRHFPLDELELASLRGTIQRAEFQLNLHKRRGQGVLSVLRPKFSGVLGEALDVAARWSGDVITIEKTVLQQNYSCYELQGEYILPGTRDRNPVEKEGGGLMKRLMSGHIGSAISSMGRWRMKLEVCKADVAEMLPLARLLSRSMDPAVHSRSKDFFVQSLHSVGLYTESLQQLLEKMRGLHAPSDDVVLEDVTLPGLSELKGHWRGSLDASGGGNGDTLAEFDFHGEDWEWGDYKTQRVVAVGAYSNDDGLHLEKIFIQKDNATIHADGTLLGPKTNLHFAVLNFPISLVPTVVQVIESTATDIVHSLRQLLAPIKGILHMEGDLRGSLAKPECDVQVRLLDGAIGGIDLGRAEVVASLTSTSRFLFNAKLEPIIQNGHVLIQGSIPVAFVQNNTLQEDAELDTSRTTWVPDWVKEKNRGTADDASDKKVSRDRNEESWNTQLAESLKGLNWQILDVGEVRIDADIKDGGMTLVTALSPHANWLQGNADVMLEVRGTVDQPVLNGHASFHRASISSPVLRKPLTNFGGTVHVKSNRLSITSLESRVSRKGKLLVKGNLPLRTSEAAPDDKIELKCEVLEVRAQKILSGQVDSQLQITGSILQPNISGNIKLSHGEAYLPHDRGGAHASNRFPSNQSVLPAGGISKMFASRYVSRFFSSESASSRATNSQSSGSVNNATQVEKQTEDVQIKPDLEICLSDLKLVLGPELKIVYPLILNFAVSGELELNGLAHPKWIKPRGILAFENGEVDLVATQVRLKREHLNIAKFEPEYGLDPMLDLVLVGSEWQFRIQGRASNWQDKLVVTSTRSVEQDALSPTEAARRFESQLAESILEGNGQLAFEKLATATLEKLMPRIEGKGEIGHARWRVVYAPQIPSLVSVDPTADPLKSLASNISFGTEVEVQLGKRLQATVVRQMKESEMAMQWTLSYLLTSRLRVLLQSAPSKRILFEYSATSQD*	2182

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja5g2812	2181	MobiDBLite	consensus disorder prediction	479	514	-	-
	Lja5g2812	2181	MobiDBLite	consensus disorder prediction	515	529	-	-
	Lja5g2812	2181	MobiDBLite	consensus disorder prediction	1887	1907	-	-
	Lja5g2812	2181	MobiDBLite	consensus disorder prediction	475	541	-	-
	Lja5g2812	2181	Pfam	TamB, inner membrane protein subunit of TAM complex	1766	2165	IPR007452	GO:0005887\|GO:0009306
	Lja5g2812	2181	MobiDBLite	consensus disorder prediction	1642	1662	-	-
	Lja5g2812	2181	PANTHER	EMBRYO DEFECTIVE 2410	6	2181	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja5g2812	Lja-Chr5	55465725	55489321	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja5g2812	-		-	gmx:100779257	3618.94

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja5g2812	5	55465725	55489321	Lja1g3828	1	48316195	48334064	PCT