Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3828 ATGAGCACCTCATTTTTCGGTTTTAAGCTTCATTCTTCTCTGAAATACAGCGACACTATCAACACCAAACATTTGCAGAGAAGGGTGTTCCACAAAAGCAAAAGCTTCACTGTATCTGCGAGACAATGTGACCCAGTAAGGCAAGTTTTTACCTTTTGTGGTCAAAATGTAAATTTGTTGAGGATAAACCTTGTTTCCACAAAAGGGTCTAGGTTGAAATGTACAGGGGGAAAAGAAAAACCACCATTTTCTTCAAGCGTGAGTTTTCTGACCCGTTTGTGGAAAAAAGGGCTTCTTTTGTTTAGGGCCTCTGTTTACATTGTTGTTATATCTGGTTTGTGTCTCTTGGTTTGGTTTGGAAAGAGTAAAGCAAAGGATTATGTTGAAGCCAGTTTATTGCCTTCTGTTTGTTTGGTAATCAGTGAGTACATTCAGCGTGATTTTCAGTTTGGTAAGGTTAGGAGAATCTCTCCGTTGAGTTTAACATTGGAGTCATGTTCATTTGGGCCTCATAAGGAGGAATTTTCTTGTGGGGAGGCTCCTAGTGTTAAGATTCGTCTTCACCCTCTTGCAAGTTTGAGGAGGGGGAAGTTGGTTGTTGATGCAGTTTTGTCAAATCCAAGTATCTTGGTTGTGCAGAAGAAGGACTATAGTTGGTTAGGAGTACCGTCGACGAATGGTGGCGTTCAGAGGCACTTGTCTACTGAAGAAGGGATAGATTATCGTACTCGAATGAAGAGGGTTTCGCGAGAGGAAGCGGCTGTTAGGATGGCAAAAGAAAGGGATGATGCAGCTAGGGAAGCTGCAGAGAAGGGTTACTTTGTTTCAGGGCAGCATTGTGGTCCCTCCCAAGGTGATGATTTAGAGGAGATTGGAAGTCATTCGATAGAAGCCGCTGGCTCCAGACCCTTTTTCTGTACAAATGAGGGGAAGCATGATCATCATATCATGGACACAGATATTGATTATGATATGAACCATGCAGATTTGGAAAAATCATTTGGAGTGAAGTTTCCTGGTTCAGGGCTTAACTCTTGGTCCAGAGTCATGAAAGGGTGTTGGGAGCACAGGTTTAAAAGGAAGGCTACAAGAAGTGACATTTCTGCATCTGGTGTTGCTCTCAGAAGAAGAATTCTTGAATGCAGTGCATTAGCAGCACATACATACTTTTGTGATCGTGATCAATCACATGGAAAGTTTGGGGGGCCTTCAACTTCTTCTGGATGTTTTCATTCTATTAATCATGGCACACATTTGGTAAATAGTGAAGTGGACAGAAGAATACCAGAATCTGTTGCCAGTGGTGATGGTAATAGAGGTGATGATAACCACAATGGAACACAATCCACAGATCTGGAAACCTGGTCTCCATCAGTTAATGAAAATGTTAGTGACCATTCAGATTGCTTAAAAACTGTAAGTGATCTAAATTTACAGACAAGAGGAGAGAGTAATTGTGAGTCTAATGAGGATGTCGCAGAACGTGTAGATGGGGTAAATGTTCTGCAGTCTGAAGGCCGTACTAACACTCTTCCTATTACATTGGATTCTGTTCATTTCAGAGGTGCAACTGTGATGCTACTTGCATACGGCGACAGGGAAGTTAGGGAGATAGAGAATGTCAATGGCCATGTGAAGTTTCATAACGACTACAGCCGTATATATGCACAATTGAGTGGAAATTGCAAGACATGGAGGTCAGGTGTTATATGCGAGGATGGTGGCTGGTTGTCTGCCAATGTTTTTGTTGATACTATTGAGCAGACATGGCATTCTAATTTGAAAGTTGACAATCTTTTTGTTCCGCTGTTTGAGAGGATCCTAGAAATTCCAATTAAATGGTCTAAAGGGAGGACCAGTGGTGAGGTTCAGTTGTGCATGTCAAAGGGTGACACTTTTCCAAATCTTCATGGACAGCTTGATGTGACAGGATTGAACTTCGAACTATTAGATGCTCCATCGTGTTTTTCTAACATATCAGCAAGGTTGTGTTTTCGTGGTCAAAGAATATTTTTACACAATGCAAGTGGCTGGTTTGGAAGCATTCCTCTTGAAGGATCAGGAGATTTTGGAATTCATCCTGAGGAGGGGGAATATCATCTTATGTTTCAGGTACCTGGTGTTGAAGTGAATGCCTTGATGAGAACTTTCAATATGAGATCACTCCTGTTCCCGGTAGCAGGATCAGTAACTGCTCTGTTTAATTGTCAAGGCCCATTGGGTGCTCCTATATTTGTGGGCACTGGAATGGTTTCCAGGACATTCTCTTCTTCACATGTTGAAACTCCTGCATCTGTAGCATCTGAAGCACTTGCTAAATTTAAAGAGATTGGTGCATTGGCAGCATTTGATTGTATACCATTTTCATATGTATCTGCCAATTTTACTTTCAACACCGATAACTGTGTCGCAGATTTATATGGAATTAGGGCAAGCCTTGTGGATGGTGGGGAAGTTCAGGGGGCTGGGACTGCTTGGATATGCCCAGAGGGTGAGGAGGATGAGACAGCAATAGATTTAAACTGCTCCGGAAGTTTAGCCCTTGAAAAAATCATGCTTCGTTACGTTCCCAATTATCATAATCTGTTGCCACTTAATTTAGGGGCTATACATGGAGAGTCAAAACTTTCGGGATCTCTTAAAAGACCGAGGTTTGATATAAAATGGACTGCACCTACAGCAGAAGGGTCTTTTAGTGATGCTAGAGGAAATCTCATAATCTCACATGATTTCATTATTGTTAATTCTGCTTCAGCTGCATTGGATTTGTATATGAAAGTACGAACATCTTATTCTGATGACTTTTCCCTCAAAAGAGAAGAGTTTCATGTACCAAGAGCCATTCCATTGACTGTTGATGGAGTTGAGTTCGATTTACACATGTGTGGGTTTGAACTCTTCAGTTTGGATACTTATGCATTGGATTCTCTGAGGCCTTTGCTTCTCAAAGGAACTGGTAGAATCAAATTTCAGGGCAAGGTTTTAGAACCTGATTGTACTATGGTGGAACAAAATTTTGACAAAAACAGGCAGCTTGTTGGTGAGGTTTCAATCTCTGGTCTCAAACTGAACCAATTGATGCTTGCACCTCACCTGTCTGGATTGTTGAGAATTTCTCCTCAGTGTATCAAGTTGGATGCCTCTGGTAGGCCTGATGAAAGTCTTGCAGTGGAGTTTATTAGCCCACTAGAGCCCAGTGACCAAGATGGTCTGCGAAGTGGGCAGCTATTGTCAATTTTCCTTCAGAAGGGGAAATTGAGGGCCAATGTAGGTTTCCAACAATATCATTCAGCTAGCTTGGAGATACAGAATTTTCCACTAGATGAGCTGGAGCTTGCTTCTCTCAGGGGAACCATACAGAGGGCAGAAATCGAGTTTAATCTTAAAAAAAGAAGGGGACATGGAATCCTATCTGTACTTCAACCAAAATTCAGTGGTGTTCTTGGTGAAGCTCTAGATGTGGCAGCTAGGTGGAGTGGAGATGTCATCACCATTGAAAAAATTATTTTCCAGCAAAGCTACAGTCATTATGAACTTCAAGGTGAATATGTGTTGCCTGGCACTCTCAACTGTAACCCTGTTGATGGAAAAGGGAATGGCTTTTTAAATAGGCTAGTGTCTGGCAATCTTGGTAGTGTTGTATCCTCCATGGGCAGATGGAGAATGAAACTTGAAGTTCGTAAAGCTGAAATTGCTGAGATGCTTCCTCTTGCAAGGCTTCTTTCTAGAAGTACAGATCCTGCAATTGTTTCAAGATCAAAGGATTTTTTTATTAAAAGTTTGCAGTCAGTGGGGATATATTCGACAAGCCCTGAAGAACTGCTTGAGATAATAAGGAGGCATACTGCCCCATCATATGATGTTGTCCATGAAGATTTAAGTCTGCTCGGTTTATCTGAACCCAAAGGATACTGGCATGGTTCTCTTGATGCAAGTGGTGGAGGGAGTGGAGACACCCTGGCAGAGTTTAATTTTCATGGCGAGGATTGGGAGTTGGGAGACTACAAAGCTCAGCGCGTCGTGGCAGTAGGTGCTTACGGTAATGATTATGGTCTGCACCTGGAGAATTTTTTTATCCAGGAGGATAATGCCACCATTCATGCTGATGGAACTTTGTTAGGGCCTAAAACCAACCTTCATTTTGCTGTCTTAAATCTTCCTGTTAGTCTAGTCCCAACTATAGTTCAGATCATTGAATCTACAACAACAGATGTTGTCCATTCTTTGCGGCAATTGTTAGCACCCATTAAGGGTATCTTGCATATGGAAGGAGATCTTAGAGGAAGTTTAACAAAACCAGAATGTGATGTGCAAATAAGGCTCCTAGATGGTGCCATTGGTGGAATAGATCTTGAACGAGCAGAAGTTGTTGCTTCTCTAACCTCAACCAGCCGGTTTCTATTCAATGCAAAGTTTGAACCTGTAATACAAAATGGTCACGTGCTAATTCAAGGAAGTATTCCTGTTACTTTTGTTCAAAATAACAAGTTACAACAAGATGCAGAATTAGATAATAGTAGGGCTACTTGGAGTCCTGATTTGGTGAAGGAGAAGAATAAAGTGGCCGCCGATGATGCCAGAGACAAGAATGTTTCTAAAGACAGAAATGAAAAAGGTTGGAATTCTCAATTATCAGAAAGCCTTAAAGGTTTAAATTGGCAAAGTTTAGATGTTGGAGAAGTCAGGGTCGATGCTGATATAAAAGATGGGGGAATGATGCTGGTAGCAGCTTTATCTCCTTATGCCAATTGGCTTCATGGAAATGCCGATGTCAAGCTTGAGGTCAGAGGTACAGTTGATCAACCATTGCTTAATGGACATGCATCATTCCGCAGGGTGTCTATATCTTCACCAGTGTTCCGAAAGCCACTGACCAACTTTGGTGGAACTGTTAACATTAAATCAAACAGGTTTTCTATCATCTCACTGGAGAGCAGACTGGGCAGAAAAGGAAAGCTTCTTGTAAAAGGGAACCTTCCTCTCAGAACTAGAGAGGCAGCCCTTCATGACAAGATTGAGTTGAAGTGTGAAGTTCTAGAAGTGCAGGCAAAAGATATAAGTGGCCAGGTCGACTCCCAGGTGGAAATAACTGGTTCCATTTTGCAACCAATCATTTCTGGAAATATTAAACTTAGTCATGGAGAAGTATATTTGCCCCAAGATAGGGGTAGTGGTGGTGCCTCTAATAGATTCACTTCAAATAGGTCTGTGCTTCCTGCTGGTGGTGTTAGTCAAGCATTTGCTACAGGATATATGTCACGGCATTTTGGCTCAGGACCTGCTTCTTTGACGACCAGAAATTCTCAGTCCTCTAGCCCTGTCAATGAGTCAACTCATGTAGAAAAGGACAGGGAGCAAGTGCAGATAAAACCACACAGAGAATTCCACCTAAGTGATTTGAAGCTAATGCTTGGACCTGAGTTGAATATAGTTTATCCTTTGATTCTTAAATTCGCTGTTAGTGGGGAGCTTGAGTTGAATGGTATCGCCCATCACAAATATATAAGACCTAAGGGTACACTGGTATTCGAGAACGGTAAAGTTGAGCTTGTTGCAACACAGGTGAGGTTAAAGAAAGAGCATCTGAACACTGCGAAGTTTGAGCCTGAGTATGGACTAGATCCTATGCTAGATTTAGCCTTGGTTGGATCTGGGTGGCAATATAGGATTCAAAGCCGGGCTAGCAATTGGCAGGACCCTGTGGAACAGGATGCTCTGTCACATATTGAGGCTGCCAGAAGGTTTGAGAGTCAGTTAGCAGAAACGATTTTGGAAGGCAATGGCCGACTTGCATTTGAAAAGCTTGCAACTGCTACTCTTGAAAAGTTAATGCCGCGAATAGAAGGGGAGGGAGAATTTGGCCAGGCCAGGTGGAAGCTAGTGTACTCACCTCAGATACCAAGTTCAGTTTCTGCTGATCCTGCTGCAGATCCTTTCAGGTTACTTGCCAGTAATTTATCATTCGGTACAGATGTTGAAGTCCAGCTTGGGAAACGTCTTCAGGCTAGAATCTTGAGGCAAATGAAGGAGTCAGAGATGGCAACACAGTGGACCTTGAGCTATCAACTTACAAGTCGTTTGCATTTGCGCCTACAGTCCGCCCCATCCAAGTGCATTTTTTTCGAATACTATGCTCCATTCTAA 6144 0.4224 MSTSFFGFKLHSSLKYSDTINTKHLQRRVFHKSKSFTVSARQCDPVRQVFTFCGQNVNLLRINLVSTKGSRLKCTGGKEKPPFSSSVSFLTRLWKKGLLLFRASVYIVVISGLCLLVWFGKSKAKDYVEASLLPSVCLVISEYIQRDFQFGKVRRISPLSLTLESCSFGPHKEEFSCGEAPSVKIRLHPLASLRRGKLVVDAVLSNPSILVVQKKDYSWLGVPSTNGGVQRHLSTEEGIDYRTRMKRVSREEAAVRMAKERDDAAREAAEKGYFVSGQHCGPSQGDDLEEIGSHSIEAAGSRPFFCTNEGKHDHHIMDTDIDYDMNHADLEKSFGVKFPGSGLNSWSRVMKGCWEHRFKRKATRSDISASGVALRRRILECSALAAHTYFCDRDQSHGKFGGPSTSSGCFHSINHGTHLVNSEVDRRIPESVASGDGNRGDDNHNGTQSTDLETWSPSVNENVSDHSDCLKTVSDLNLQTRGESNCESNEDVAERVDGVNVLQSEGRTNTLPITLDSVHFRGATVMLLAYGDREVREIENVNGHVKFHNDYSRIYAQLSGNCKTWRSGVICEDGGWLSANVFVDTIEQTWHSNLKVDNLFVPLFERILEIPIKWSKGRTSGEVQLCMSKGDTFPNLHGQLDVTGLNFELLDAPSCFSNISARLCFRGQRIFLHNASGWFGSIPLEGSGDFGIHPEEGEYHLMFQVPGVEVNALMRTFNMRSLLFPVAGSVTALFNCQGPLGAPIFVGTGMVSRTFSSSHVETPASVASEALAKFKEIGALAAFDCIPFSYVSANFTFNTDNCVADLYGIRASLVDGGEVQGAGTAWICPEGEEDETAIDLNCSGSLALEKIMLRYVPNYHNLLPLNLGAIHGESKLSGSLKRPRFDIKWTAPTAEGSFSDARGNLIISHDFIIVNSASAALDLYMKVRTSYSDDFSLKREEFHVPRAIPLTVDGVEFDLHMCGFELFSLDTYALDSLRPLLLKGTGRIKFQGKVLEPDCTMVEQNFDKNRQLVGEVSISGLKLNQLMLAPHLSGLLRISPQCIKLDASGRPDESLAVEFISPLEPSDQDGLRSGQLLSIFLQKGKLRANVGFQQYHSASLEIQNFPLDELELASLRGTIQRAEIEFNLKKRRGHGILSVLQPKFSGVLGEALDVAARWSGDVITIEKIIFQQSYSHYELQGEYVLPGTLNCNPVDGKGNGFLNRLVSGNLGSVVSSMGRWRMKLEVRKAEIAEMLPLARLLSRSTDPAIVSRSKDFFIKSLQSVGIYSTSPEELLEIIRRHTAPSYDVVHEDLSLLGLSEPKGYWHGSLDASGGGSGDTLAEFNFHGEDWELGDYKAQRVVAVGAYGNDYGLHLENFFIQEDNATIHADGTLLGPKTNLHFAVLNLPVSLVPTIVQIIESTTTDVVHSLRQLLAPIKGILHMEGDLRGSLTKPECDVQIRLLDGAIGGIDLERAEVVASLTSTSRFLFNAKFEPVIQNGHVLIQGSIPVTFVQNNKLQQDAELDNSRATWSPDLVKEKNKVAADDARDKNVSKDRNEKGWNSQLSESLKGLNWQSLDVGEVRVDADIKDGGMMLVAALSPYANWLHGNADVKLEVRGTVDQPLLNGHASFRRVSISSPVFRKPLTNFGGTVNIKSNRFSIISLESRLGRKGKLLVKGNLPLRTREAALHDKIELKCEVLEVQAKDISGQVDSQVEITGSILQPIISGNIKLSHGEVYLPQDRGSGGASNRFTSNRSVLPAGGVSQAFATGYMSRHFGSGPASLTTRNSQSSSPVNESTHVEKDREQVQIKPHREFHLSDLKLMLGPELNIVYPLILKFAVSGELELNGIAHHKYIRPKGTLVFENGKVELVATQVRLKKEHLNTAKFEPEYGLDPMLDLALVGSGWQYRIQSRASNWQDPVEQDALSHIEAARRFESQLAETILEGNGRLAFEKLATATLEKLMPRIEGEGEFGQARWKLVYSPQIPSSVSADPAADPFRLLASNLSFGTDVEVQLGKRLQARILRQMKESEMATQWTLSYQLTSRLHLRLQSAPSKCIFFEYYAPF* 2048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3828 2047 MobiDBLite consensus disorder prediction 438 454 - -
Lja1g3828 2047 MobiDBLite consensus disorder prediction 422 454 - -
Lja1g3828 2047 MobiDBLite consensus disorder prediction 1758 1776 - -
Lja1g3828 2047 MobiDBLite consensus disorder prediction 1519 1540 - -
Lja1g3828 2047 PANTHER EMBRYO DEFECTIVE 2410 84 2045 - -
Lja1g3828 2047 MobiDBLite consensus disorder prediction 1758 1786 - -
Lja1g3828 2047 Pfam TamB, inner membrane protein subunit of TAM complex 1644 1884 IPR007452 GO:0005887|GO:0009306
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3828 Lja-Chr1 48316195 48334064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3828 - - mnt:21390778 2491.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2812 5 55465725 55489321 Lja1g3828 1 48316195 48334064 PCT