Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2808 ATGATGCTGAGGAAGAGGACAGGGTCAATCCAGGAAGATCAACAACAACAACACCACATGGGTCAAATGGAAGTCTCTGATACAAATTGTGACTACCATCATGCCTTGGAGAGTAATGTCAAAAGCAGCAACTCACTTTTCAAAGCCCCAATTTTATTTGTGGGTTTGGGACCAAAGGGCTTGTTGGATTCTGATTCAGTTAGGAGCCCCACTTCCCCACTAGATGTAACATTGCTTTCAAATCTAGGAAACCTCTTAAGAACCCCAAGATCATCATCCATTGAGGGGCAGCAGCAACATAGGAGCTGGGACTGTGCCAAAGTTGGTTTAGGTATCATAGATTCTCTGGAGGATTGTTCTAATGTTTCTGGGAAAATTAATATTCTCCTATCATCTGAGACCAAGAAGACTAGTCTCAGTCCCCAAATGATTACCAAACCCCCAACTTGTAAGTCCTGTGTGGATCCTGTTCAGGCCTCTAAGTCTTTACCTAAAGATTTTTATAAGCTTCCCTATACCCATAATAGTTCTTCTGCTAACCACAAGGGTGAATCCACTGTTCTTTTTGAGATTGGAGAGACCCCACTAGAATATGAGTCCCTTGGGAAAAATTGTTCTTGTTCATTGGACTCCTCCAGTTCAATGAAAAATCTTTCTGGTTTAACTGGTTCTAACTTTGATTCAGATTCTGAGATTTTATCCTCTCCTCCTCATTTTATTGGAGGAAGCCACAACCCAAACACCTTGCCACCTGCAGAGTTAAATTCAAATTCAAACCCTGTGCCAGCATCATCCTCCTCTAATGAATTTATCAAGTCCCTATCAGCTAGTGAGATTGAAAACTCTGAGGACTACACATGTGTGATTTCCCATGGTCCCAATCCCAAAACAACCCATATTTTCTGTGACTCTATCTTGGAAGTTCATGCTAATGATCTTAAAAAGTATTGTAAGAGTGAAGAAGAGGAAGAGGAGGAGGCGAAACTGTCCTCTCCCATGGTTAACAAGTTACAGACTCCAAACCAATTTCCCTCTGGTGACTTTTTGTGTGTCTGTTACTATTGCAACAATGAACTGGTAGAGGGGGAAGATATTTACATTTATAGAGGTGAAAAATCATTTTGCAGTCCAGCTTGCCGTGCCATGGAGATCATGATTGATGAGGAGCTAGAAGAACCCGATTCATCATCTGAGAAATCTCTAGAGGGGGAATCTGGTGGTGAACTTTTTGAAACAGGCTTCATCAAAGCTATATAG 1257 0.4153 MMLRKRTGSIQEDQQQQHHMGQMEVSDTNCDYHHALESNVKSSNSLFKAPILFVGLGPKGLLDSDSVRSPTSPLDVTLLSNLGNLLRTPRSSSIEGQQQHRSWDCAKVGLGIIDSLEDCSNVSGKINILLSSETKKTSLSPQMITKPPTCKSCVDPVQASKSLPKDFYKLPYTHNSSSANHKGESTVLFEIGETPLEYESLGKNCSCSLDSSSSMKNLSGLTGSNFDSDSEILSSPPHFIGGSHNPNTLPPAELNSNSNPVPASSSSNEFIKSLSASEIENSEDYTCVISHGPNPKTTHIFCDSILEVHANDLKKYCKSEEEEEEEAKLSSPMVNKLQTPNQFPSGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEIMIDEELEEPDSSSEKSLEGESGGELFETGFIKAI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2808 418 MobiDBLite consensus disorder prediction 8 23 - -
Lja5g2808 418 PANTHER DUF581 FAMILY PROTEIN 2 412 - -
Lja5g2808 418 PANTHER FCS-LIKE ZINC FINGER 11 2 412 IPR044585 -
Lja5g2808 418 MobiDBLite consensus disorder prediction 232 267 - -
Lja5g2808 418 MobiDBLite consensus disorder prediction 248 267 - -
Lja5g2808 418 Pfam zinc-finger of the FCS-type, C2-C2 342 389 IPR007650 -
Lja5g2808 418 MobiDBLite consensus disorder prediction 1 23 - -
Lja5g2808 418 ProSiteProfiles Zinc finger FLZ-type profile. 347 391 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2808 Lja-Chr5 55388562 55390165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2808 - - gmx:100789230 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2808 5 55388562 55390165 Lja5g2808 5 55388562 55390165 ECH
Lja5g2808 5 55388562 55390165 Lja1g3819 1 48222663 48225515 PCT