Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2742 ATGTTCTGTGCTTCACAAGCCTCAACAGCCATATGTCTTAGCATGGACCAAGCCTCCTGCTCCTCTTCCAACACCATTCAACTCGGAGGCCGAGCAATCGACCGCCACAACCCCATTATCAACGATTCAAGAAGAAGCACCTCTAGAGCCCCATGTTCTTCATCTCAGCCACCCATCAACCCAAAATCTTACCAAAAATCCAAGATAAAAAACTCTTCTTCAAACCCAAATGGCCAGAACAAGAAAAATGCAGCTAAAGTTCATGATCAGAAGAAGAAAAGCACAGCAGAAAAGCTCACTGACAATGTCACCAACAACACCAAAAGCCACTCTTCTAAGCCAATTGATAGTACCCTGAGAAGGACTTGGCTTAAGGCACCTAATGAGTCAGTCACTTCTCTTGGTTCAACTAGATCTTTGCTCAGTAACACTGCACTCTTAGATGGTTCTTCAGATTATGAGCCAGTTTTGGCATTAAACAAAGGTGATACTAAAAAGGCTCAAGTTGTTTGTGAAGATGAAATCCACCCTGCATCTAAATCCTCTAGCCCTTCTCGTCCAAAATCTGGTTCCTCAGACCAGGTTGTAGTGCTGAGAGTTTCTTTGCATTGCAAAGGCTGTGTAGGGAAGGTGAGGAAACACCTCTCCAGAATGCAAGGAGTTAGTTCCTTCAACATAGATTTTGCAGCAAAGAAAGTGACAGTAATTGGGGATGTGACTCCATTAAGTGTCTTGGCAAGCATATCAAAGGTGAAGAGTGCACAATTTTGGCCAACATCAGCCTCAGCTCTTGGATCTGGTTGCGCAGAAACCAAGATACAAATTTGA 828 0.4372 MFCASQASTAICLSMDQASCSSSNTIQLGGRAIDRHNPIINDSRRSTSRAPCSSSQPPINPKSYQKSKIKNSSSNPNGQNKKNAAKVHDQKKKSTAEKLTDNVTNNTKSHSSKPIDSTLRRTWLKAPNESVTSLGSTRSLLSNTALLDGSSDYEPVLALNKGDTKKAQVVCEDEIHPASKSSSPSRPKSGSSDQVVVLRVSLHCKGCVGKVRKHLSRMQGVSSFNIDFAAKKVTVIGDVTPLSVLASISKVKSAQFWPTSASALGSGCAETKIQI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2742 275 MobiDBLite consensus disorder prediction 43 83 - -
Lja5g2742 275 SUPERFAMILY HMA, heavy metal-associated domain 194 251 IPR036163 GO:0046872
Lja5g2742 275 CDD HMA 197 250 IPR006121 GO:0046872
Lja5g2742 275 MobiDBLite consensus disorder prediction 31 121 - -
Lja5g2742 275 Pfam Heavy-metal-associated domain 198 249 IPR006121 GO:0046872
Lja5g2742 275 MobiDBLite consensus disorder prediction 99 121 - -
Lja5g2742 275 Gene3D - 191 255 - -
Lja5g2742 275 ProSiteProfiles Heavy-metal-associated domain profile. 194 251 IPR006121 GO:0046872
Lja5g2742 275 PANTHER OS08G0405700 PROTEIN 1 272 IPR044526 -
Lja5g2742 275 PANTHER COPPER CHAPERONE 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2742 Lja-Chr5 54375619 54378850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2742 - - gmx:100797952 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0916 1 8986198 8988591 Lja5g2742 5 54375619 54378850 PCT