Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2736 ATGAATGTGGTTGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTGTACTCAGTTGCTACCCCTTTTCATCCTTTTGGTGGGGCTGTTGATGTCATTGTTGTTCAGCAGCCGGATGGGACATTTCGAAGCACGCCATGGTATGTTCGCTTTGGTAAGTTTCAGGGTGTTCTCAAAGGTGCTGAAAAAGTTGTTAGAATAAATGTTAATGGCGTCGAAGCCAACTTCCATATGTATCTTGATAATTCCGGGGAGGCTTATTTTGTGAAGGAGGTGGATGATGAAAAGGGGGTAGAGTCGATTCAGGATTCTAGTAAGAATGATATTAGTTATTTGAGTAATGGTCATAGACTTGATCATAGCATCTCTGACTCCGGAGTGCTTCTGTTGAAAGATGAAGGTGATTCGTCAGTTCTGCCTCGAATTCAAAGGACAGAGTCTGATGGGAGATATTATGAGTTCCAAGACGATCGATCTTCGTTTGATGATTTTGAGTCTAATTCTTATGAGAGTCTAGAGGGAGAAAATGTTGTGGACTCACAGGGTAACCCGGAGATGGTCTTGGTGAGTGTCGATGGTCATATATTGACGGCTCCTATCTCAGAATCAGAGCAGAATGAGGAGAATGTGCAGTTAAGAAATCCTCAATTTCATCTGGGACCAGGTGAAGAGACAGACATATGTGAAGGCGATGGAGAGTTTATTTCAGGTGAAAATGCTTGGGCTGCTGATTATCTTAGTAAGTTGGATGCTCCAACAGCTGATGTCCAAGTCCAACCCAGACACTGTGACACTAATGGTGACGATAATAATTCTAGACCCCCACTTGAAGTTTGTCAACTAGAGGAGGTAAATATTTGTAAAGAACAGCAAACTTTGGAGATAAAATATCAAGAAGATCTTAACGTGAAAGCTGATTCAGAAGGGGTTGCATCTGGTATCAAGAGGGAGAATGTTTTTAAAAGCTGTTTGGAGCTACAAGAATTTGCTCAGCAGGCTGGAAATGCTGATTCACAAGATGCAGGTTCATCGTTGGAAGTTCAAAACTCAGCCGAGGAATCTAATGCAAGTTGTCCAGTAGTTGATGAAAATGAACAAGAGAGCGACGCACAACCTAAAAACATTGTTGAGTTATCTCCCTCCAGTGTTTCCCCTTCTTCCGAAAGCCATAGATCTCCAAATTCAGAATTGGGACTTCAAGAGGTTGAGAAAAATGCATCACTGGAACTTGAAAGTGCTTCTGGCTCTCCTCCTGTTACTGTTGATACTGAATGCAATGATGAACTAGTTGTCAAGTCAGTATCAAATGACAGGGTAGATGAGAGTCAACAAATCGCGGCACTTGAAGATACTAGTAACACACGTGAGGTAGTGGAACCTCAAACTGAAACTGCAAGTAAAGGTGATCAAAGCCATTCCGGTTTAGGATTTGAGATCTCACTTTGCGGTCATGAACTTAAGGTGGGTATGGGTTCAGTTGCTGCTGCTGAAGTGTTTGAAGCACATCGGATATCGGCAGTGGACTTCACAAGTTCTGCACCATCAATAATTAAGAATCAAAATCTTGTCATCAAGTTTAAAGATAAGTACTTGACATGGGACAAGGCTGCTCCTATAGTTCTTGGATTGGCTGCATTTGGTTTAGATTTACCTGTTGAGCCCAAAGACACAATTCCTATGGAACAGGATTATGCATTGAAGTCTAGGGATGATGATCTTGGATCGTCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTCGAAGGGTCAAGACAGTTGAGCACACTAATAGCAACTCATCAAATGAGGAGGTATTTCTTGATTCAGAGTGTGCATCTTTTATAGAGCCAAGTCCGACATCCAGTACCCCGGGATCTCCTCATAAGCAATTTATAAGGACAAATGTTCCAACCAATGAACAGATAGCATCCTTGAATCTTAAAGATGGTCAAAATTTGGTAACCTTCAGTTTCTGTACGAGGGTTCTTGGAACACAGCAGGTTGATGCCCATATATACTTATGGAAGTGGAATGCAAGAATCGTAATTTCAGATGTTGATGGAACTATTACAAAGTCTGATGTTTTGGGCCAGTTCATGCCCTTAGTTGGCAAAGATTGGACACAATCTGGAGTGGCGAGGCTTTTCTCTGGCATTAAGGAAAATGGATACCAGCTGCTCTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCTAACCAGGAACTTCTTACTTAACCTCAAACAGGATGGAAAAACCTTACCAAATGGACCTGTTGTTATTTCACCTGATGGATTATTTCCTTCACTTTACCGAGAAGTGATAAGAAGAGCACCTCACGAGTTCAAAATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAATCCATTCTATGCGGGATTTGGTAATAGAGACACTGATGAACTTAGTTACAGGAAGATCGGAATCCCAAAGGGAAAAATATTTATTATTAACCCTAAGGGTGAGGTGGCTATTAGTCAACGAATTGGTGCAAAGTCATATACATCATTACATACCCTCGTCAATGACATGTTTCCACCTACTTCTTTGGTCGAGCAGGAGGACTACAACTCATGGAATTATTGGAGAATGCCAATGGCAGATATTGACTAG 2649 0.4171 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQPDGTFRSTPWYVRFGKFQGVLKGAEKVVRINVNGVEANFHMYLDNSGEAYFVKEVDDEKGVESIQDSSKNDISYLSNGHRLDHSISDSGVLLLKDEGDSSVLPRIQRTESDGRYYEFQDDRSSFDDFESNSYESLEGENVVDSQGNPEMVLVSVDGHILTAPISESEQNEENVQLRNPQFHLGPGEETDICEGDGEFISGENAWAADYLSKLDAPTADVQVQPRHCDTNGDDNNSRPPLEVCQLEEVNICKEQQTLEIKYQEDLNVKADSEGVASGIKRENVFKSCLELQEFAQQAGNADSQDAGSSLEVQNSAEESNASCPVVDENEQESDAQPKNIVELSPSSVSPSSESHRSPNSELGLQEVEKNASLELESASGSPPVTVDTECNDELVVKSVSNDRVDESQQIAALEDTSNTREVVEPQTETASKGDQSHSGLGFEISLCGHELKVGMGSVAAAEVFEAHRISAVDFTSSAPSIIKNQNLVIKFKDKYLTWDKAAPIVLGLAAFGLDLPVEPKDTIPMEQDYALKSRDDDLGSSSSGRRWRLWPIPFRRVKTVEHTNSNSSNEEVFLDSECASFIEPSPTSSTPGSPHKQFIRTNVPTNEQIASLNLKDGQNLVTFSFCTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSGIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISQRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWRMPMADID* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2736 882 Pfam lipin, N-terminal conserved region 1 97 IPR007651 -
Lja5g2736 882 SUPERFAMILY HAD-like 674 824 IPR036412 -
Lja5g2736 882 MobiDBLite consensus disorder prediction 447 470 - -
Lja5g2736 882 SMART lns2 682 838 IPR031315 -
Lja5g2736 882 MobiDBLite consensus disorder prediction 333 363 - -
Lja5g2736 882 MobiDBLite consensus disorder prediction 333 395 - -
Lja5g2736 882 Pfam LNS2 (Lipin/Ned1/Smp2) 636 858 IPR013209 -
Lja5g2736 882 MobiDBLite consensus disorder prediction 370 395 - -
Lja5g2736 882 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 882 - -
Lja5g2736 882 PANTHER LIPIN 1 882 IPR026058 -
Lja5g2736 882 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 476 584 IPR031703 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2736 Lja-Chr5 54264893 54273389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2736 K15728 - gmx:100795884 1404.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0911 1 8935838 8946368 Lja5g2736 5 54264893 54273389 PCT