Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0911 ATGTGGTGGGAAAAGTTGAATTCGAAACTCTATTCAGTTGCTACCCCTTTTCACCCCTTTGGTGGGGCTGTTGATATAATTGTTGTTAAGCATCAAGATGGGACTTTCCGGAGCACGCCGTGGTATGTTCAGTTTGGTAAATTTCAGGGTGTTCTCAAAGGCTCCGAGAAGGTTGTTCGGATAAGCGTCAATGGGGTTGAGGCGAATTTCCATATGTATCTTGATAATTCAGGGGAGGCTTATTTTGTAAAAGAGGTGGATGATGATGATGTTGATAAAGAAGTCAAGTCAAATGGGGTTGTGGATGATGCTCCTAACTCTGAATTTGCCCGTGAAGACGGAGATGTTGAAATTGATGGCATAGATAATAGTCATCTGAATATGGATGATACTCATGGTTATAGACTTGACCTTAGCATATCTGATTCAAGGGTGGTTCAGTTGTCAGGTGAAAGTCATTCCTCAGTTTTGCCGCAAATTCAAGAGGAAGAATCTGATGCTGATAGAGAATTTTATGAAGTCCAAGATGGTCCATCCTCTTTTGAAGGTTCAGCTGAGTTGTCGGAATGTGGGTCTGGTCGATATGAGAATTTTGTGGACTTGCCGGGTTCCCATTCGAAGGTGGTATTGGTTAGAGTTGGTGGTCAAATATTGATGGCCCCTATCTCAGAATCAGAGCGGAATGAGGAGAATTTGCAGTTAGATCCTCAATTTCATCTGGGCCCAGGTGAAGCTACTGACTTCTATGAAAGCAATGAGGTGTTAAGTTCTGGTGAAAATGCTTGGGCTGCTGATTATGCCAGTCAGCTAGATGCTTCATCAGCTGATGATCTATCCGGTAGTTGTAACACTAACATCGATAATAATACTTCTGAGATCCTGCTTGAAGTTTGCCAAAGAGAGGAGGAACATAATTGTCACACAGAGGAAACCTTGGTGGTTAAAAATCAAGATTTTCATTTGCCAACTGATTCAGAAGAGGATGCTTCTTGTATGAAGAGGGAGAATGTCTTTCAAAGTTGTATGGAGCTGCATGAACTTGCTCAGCAGGCTGGAAATGCTGATTCTCAAGATGCAGACTCCTCATTGGAGATTCAAAATTTAGCTGAGGAATCTAATGAAAGTTGTTCAACTGTTGATAATAATGAACAAGAGAACATCAAACAATCTAGTAACTTTGACAAGTTATCTCCCGTTAGTGAGCCTATTTCCGTGGAGGGCACTCATTCTGGTGCTATTGATACTGAATGGAATGATGAACATATTGGCAAGTCAGAGTCAAATGATAGTGTAGATGATAGTCAACAAACCCCTTCATTTGAAACTGCAAGTAGGAAAAGCGAGGTAATTGAACCTCATGCAGCAACATCCGAAGAGAGGGACCAGCCTCATTCTGGATTGAGATTTGATGTCTCACTTTGTGGTCATGAACTAAAGGCGGGTATGGGTTTGGTTGCTGCTGCTGAAGTGTTTGAAGCACATCAGATATCTGCAGAGCAATTTAGAAGTTCTGCCCCATCTATAATTAAGAATGAAAATCTTGTTGTGAAATTCAAAGAAAGGTATCTGCTGTGGGAAAAGGCCGCGCCTCTTGTTCTTGGAATGGCTGTATTTGGTTTAGACTTGCCTGTTGAGCCCAAAGATACAATTCCTGTGGAACAGGATGATGCACCAAAGTCCAGGGATGTTGATACTGGACCAGCTTTGTCTGGACGCAGATGGAGACTCTGGCCTATTCCTTTTCGAAGAGTCAAGACAATTGAGCGTAGTTCATCGACTGACGAAATATTTCTAGATTCTGAGTGTGAATTGCAAACTTCGGTTGTGGAGTCAACTTCAACTTCTGGCAGGCAAGAGTCTCCTCGCAAGCGATTTGTAAAAACAAATGTTCCCTTGAATGAGATGATAGCATCCATGAATCTCAAAGACGGTCAAAATTCAGTAACATTCAGTTTCTCTACGAGGGTTCTTGGAAAACAACAGGTTGATGCTCATATATACTTGTGGAAGTGGAATGCAAAAATTGTAATTTCAGATGTGGATGGAACTATTACCAAATCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGTCACAGTCTGGAGTAGCAAGGCTTTTCTCAGCTATTAAGGAGAATGGATACCAGCTAATGTTTTTGAGTGCACGTGCTATTGTCCAGGCTTATCTAACCAGGAACTTCTTGCTTAACCTGAAACAGGACGGAAAAGCCTTACCAAATGGGCCTGTAGTTATTTCACCTGATGGCTTATTTCCCTCACTTTACCGAGAAATAATAAGAAGAGCACCTCATGAGTTCAAGATTGCATGCCTGGAGGATATCAGAAGACTTTTCCCTTCTGATTACAATCCATTCTATGCTGGGTTTGGCAATAGAGACACTGATGAACTTAGTTACAAGAAGATAGGAATCCCCGAGGGCAAAATATTTATTATTAACCCTAAGGGTGAGGTTGCAACAAGCCATTGTAATTATGCAAAATCTTACACATCATTACACACTCTCGTGGATGACATGTTTCCAGCTACTTTGATTGAGAAGGAGGACTTCAACCCGTGGAACTATTGGAGATTGCCTTTACCAGATGTAGATGATGATTAG 2631 0.4162 MWWEKLNSKLYSVATPFHPFGGAVDIIVVKHQDGTFRSTPWYVQFGKFQGVLKGSEKVVRISVNGVEANFHMYLDNSGEAYFVKEVDDDDVDKEVKSNGVVDDAPNSEFAREDGDVEIDGIDNSHLNMDDTHGYRLDLSISDSRVVQLSGESHSSVLPQIQEEESDADREFYEVQDGPSSFEGSAELSECGSGRYENFVDLPGSHSKVVLVRVGGQILMAPISESERNEENLQLDPQFHLGPGEATDFYESNEVLSSGENAWAADYASQLDASSADDLSGSCNTNIDNNTSEILLEVCQREEEHNCHTEETLVVKNQDFHLPTDSEEDASCMKRENVFQSCMELHELAQQAGNADSQDADSSLEIQNLAEESNESCSTVDNNEQENIKQSSNFDKLSPVSEPISVEGTHSGAIDTEWNDEHIGKSESNDSVDDSQQTPSFETASRKSEVIEPHAATSEERDQPHSGLRFDVSLCGHELKAGMGLVAAAEVFEAHQISAEQFRSSAPSIIKNENLVVKFKERYLLWEKAAPLVLGMAVFGLDLPVEPKDTIPVEQDDAPKSRDVDTGPALSGRRWRLWPIPFRRVKTIERSSSTDEIFLDSECELQTSVVESTSTSGRQESPRKRFVKTNVPLNEMIASMNLKDGQNSVTFSFSTRVLGKQQVDAHIYLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWSQSGVARLFSAIKENGYQLMFLSARAIVQAYLTRNFLLNLKQDGKALPNGPVVISPDGLFPSLYREIIRRAPHEFKIACLEDIRRLFPSDYNPFYAGFGNRDTDELSYKKIGIPEGKIFIINPKGEVATSHCNYAKSYTSLHTLVDDMFPATLIEKEDFNPWNYWRLPLPDVDDD* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0911 876 Pfam lipin, N-terminal conserved region 5 93 IPR007651 -
Lja1g0911 876 Pfam LNS2 (Lipin/Ned1/Smp2) 630 851 IPR013209 -
Lja1g0911 876 MobiDBLite consensus disorder prediction 369 449 - -
Lja1g0911 876 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 405 874 - -
Lja1g0911 876 PANTHER LIPIN 405 874 IPR026058 -
Lja1g0911 876 MobiDBLite consensus disorder prediction 369 398 - -
Lja1g0911 876 SMART lns2 675 831 IPR031315 -
Lja1g0911 876 PANTHER LIPIN 9 410 IPR026058 -
Lja1g0911 876 MobiDBLite consensus disorder prediction 429 444 - -
Lja1g0911 876 MobiDBLite consensus disorder prediction 413 428 - -
Lja1g0911 876 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 9 410 - -
Lja1g0911 876 SUPERFAMILY HAD-like 667 818 IPR036412 -
Lja1g0911 876 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 470 553 IPR031703 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0911 Lja-Chr1 8935838 8946368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0911 K15728 - gmx:100780784 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0911 1 8935838 8946368 Lja5g2736 5 54264893 54273389 PCT