Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2719 ATGGCGGCCGTGACCCGCCTCGCGAAGCGCTCGTCCTCCGTCTCCTCCCTCATCTCCAGGAGACGCTTCTCCTCCGAAGTCAACTCTCACGACCCGCCGCACAACGCCGCGCCCTTCCGACTAGTCCGGCCGCGTGAAGACCCGAGTAACAGCCATGTCCGGTGGGTCTTCCTGGGCTGCCCCGGCGTTGGCAAAGGCACCTACGCCAGCCGCCTCTCTAACCTCCTCCACGTCCCTCACATCGCCACCGGCGATCTCGTCCGTGAAGAGCTCACCTCCTCTGGCCCCCTTTCCACCGAGTTATCAGAAATTGTAAAGCAAGGTCAATTGGTGTCAGATGAAATTATTATAAGTTTATTGTCAAAGAGACTTGCTGCTGGAGAAGCGAAAGGTGAATTGGGATTTATTCTCGATGGTTTTCCTCGAACAATAAAGCAAGCAGAAATACTAGAAGGGGTAACTGACATTGACTTGGTTATTAATCTGAGGCTCCGAGAAGATGTACTGCTTGAAAAATGCCTTGGTAGAAGAATTTGCAATCAGTGTGGGGGAAATTTTAATGTTGCTTCCATTAACATCAAGGCTGAGAATGGGAACCCCGAAATTGTCATGGCTCCACTTCTTCCTCCTACGGATTGTATGTCAAAGCTCACTACTCGATCAGATGATACTGAAGCAGTGGTCAAAGAAAGGCTTCGAATATACAGAGAAATGAGTCGGCCTGTGGAGGAGTTTTATCGCAGTAGAGGAAGATTATTGGAGTTTAACCTGCCTGGGGGAATCCCAGAATCTTGGCCAAAGTTGCTACATGCTCTTAATCTTGATAACTACGAGGACAAGCGCATTGCCACAGCTTAA 858 0.5 MAAVTRLAKRSSSVSSLISRRRFSSEVNSHDPPHNAAPFRLVRPREDPSNSHVRWVFLGCPGVGKGTYASRLSNLLHVPHIATGDLVREELTSSGPLSTELSEIVKQGQLVSDEIIISLLSKRLAAGEAKGELGFILDGFPRTIKQAEILEGVTDIDLVINLRLREDVLLEKCLGRRICNQCGGNFNVASINIKAENGNPEIVMAPLLPPTDCMSKLTTRSDDTEAVVKERLRIYREMSRPVEEFYRSRGRLLEFNLPGGIPESWPKLLHALNLDNYEDKRIATA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2719 285 TIGRFAM adk: adenylate kinase 54 272 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lja5g2719 285 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Lja5g2719 285 PANTHER ADENYLATE KINASE 1 285 - -
Lja5g2719 285 Pfam Adenylate kinase 58 250 - -
Lja5g2719 285 Hamap Adenylate kinase [adk]. 53 273 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 Gene3D - 43 274 IPR027417 -
Lja5g2719 285 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 PRINTS Adenylate kinase signature 237 251 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 PRINTS Adenylate kinase signature 220 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 PANTHER NUCLEOTIDE KINASE 1 285 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 CDD ADK 54 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja5g2719 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2719 Lja-Chr5 54015126 54019222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2719 K00939 - gmx:100777619 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0893 1 8756001 8758916 Lja5g2719 5 54015126 54019222 PCT